Pairwise Alignments

Query, 334 a.a., Holliday junction branch migration DNA helicase RuvB from Vibrio cholerae E7946 ATCC 55056

Subject, 350 a.a., Holliday junction DNA helicase RuvB (NCBI) from Rhodospirillum rubrum S1H

 Score =  405 bits (1041), Expect = e-118
 Identities = 196/315 (62%), Positives = 252/315 (80%)

Query: 18  EEVIDRAIRPKKLADYQGQDHVRDQMEIFIQAAQMRQEALDHLLIFGPPGLGKTTLANIV 77
           E  +D A+RP+ LAD+ GQ   R+ + +F+QAA+ R EA+DH+L  GPPGLGKTTLA IV
Sbjct: 18  EGEVDAALRPQSLADFVGQRQTRENLGVFVQAARARGEAMDHVLFHGPPGLGKTTLAQIV 77

Query: 78  ANEMGVNIRTTSGPVLEKAGDLAALLTNLEENDVLFIDEIHRLSPMVEEVLYPAMEDYQL 137
           A E+GV  R TSGP++ KAGDLAA+LTNLE  DVLFIDEIHRL+P +EEVLYPAMED+QL
Sbjct: 78  ARELGVGFRGTSGPMIVKAGDLAAILTNLEPRDVLFIDEIHRLNPAIEEVLYPAMEDFQL 137

Query: 138 DIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIVQRLEYYKVADLQHIVQR 197
           D++IGEGPAARS++IDLPPFTL+GATTR+G LT+PLRDRFGI  RL++Y+  +L  IV R
Sbjct: 138 DLIIGEGPAARSVRIDLPPFTLVGATTRSGLLTTPLRDRFGIPLRLDFYETDELVQIVTR 197

Query: 198 SAQCLGLSMDSEGALEVARRARGTPRIANRLLRRVRDYAEVKGDGHICAQTADRALNMLD 257
            ++ LG+++  EGA EVARR+RGTPR+A RLLRRVRD+A V G   + A  AD ALN L+
Sbjct: 198 GSRLLGMALTDEGAREVARRSRGTPRVAGRLLRRVRDFAAVAGRSPVDAFIADAALNRLE 257

Query: 258 VDHQGFDYMDRKLLLAIMEKFSGGPVGIDNLAAAIGEEKDTIEDVLEPFLIQQGYLQRTP 317
           VD +G D MDR+ L  + + + GGPVG+D LAAA+ EE+DT+EDV+EP+LIQQG+++RTP
Sbjct: 258 VDGRGLDAMDRRYLSRMADHYGGGPVGVDTLAAALAEERDTVEDVIEPYLIQQGFIKRTP 317

Query: 318 RGRIATDRAYLHFGI 332
           RGR+ T  A+ H G+
Sbjct: 318 RGRMLTAIAWTHLGL 332