Pairwise Alignments

Query, 334 a.a., Holliday junction branch migration DNA helicase RuvB from Vibrio cholerae E7946 ATCC 55056

Subject, 349 a.a., Holliday junction branch migration DNA helicase RuvB from Rhodopseudomonas palustris CGA009

 Score =  400 bits (1027), Expect = e-116
 Identities = 201/332 (60%), Positives = 250/332 (75%), Gaps = 3/332 (0%)

Query: 1   MIEADRLIAPISNHFKDEEVIDRAIRPKKLADYQGQDHVRDQMEIFIQAAQMRQEALDHL 60
           M +  RL+ P     + +++ D A+RP+ L+++ GQ   R  +++FI AA+ R+EALDH+
Sbjct: 1   MTDPSRLVTP---ERRGDDLGDAALRPQNLSEFVGQQQARANLQVFIDAARKRKEALDHV 57

Query: 61  LIFGPPGLGKTTLANIVANEMGVNIRTTSGPVLEKAGDLAALLTNLEENDVLFIDEIHRL 120
           L  GPPGLGKTTLA IVA E+GV  R TSGPV+ KAGDLAALLTNLEE DVLFIDEIHRL
Sbjct: 58  LFVGPPGLGKTTLAQIVARELGVGFRATSGPVIAKAGDLAALLTNLEERDVLFIDEIHRL 117

Query: 121 SPMVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIV 180
           SP VEEVLYPAMED+QLD++IGEGPAARS+KIDL  FTL+GATTRAG LT+PLRDRFGI 
Sbjct: 118 SPSVEEVLYPAMEDFQLDLIIGEGPAARSVKIDLSKFTLVGATTRAGLLTNPLRDRFGIP 177

Query: 181 QRLEYYKVADLQHIVQRSAQCLGLSMDSEGALEVARRARGTPRIANRLLRRVRDYAEVKG 240
            RL +Y + +L+ IV R A+ LG  + ++GA E+ARRARGTPRIA RLLRRVRD+A    
Sbjct: 178 IRLNFYTIEELESIVTRGARVLGTPITADGANEIARRARGTPRIAGRLLRRVRDFASAAD 237

Query: 241 DGHICAQTADRALNMLDVDHQGFDYMDRKLLLAIMEKFSGGPVGIDNLAAAIGEEKDTIE 300
              I    AD AL  L+VD  G D MDR+ L  I   + GGPVG++ +AAA+ E +D IE
Sbjct: 238 AEAIDRAIADHALGALEVDSAGLDAMDRRYLTTIALNYGGGPVGVETMAAALSEPRDAIE 297

Query: 301 DVLEPFLIQQGYLQRTPRGRIATDRAYLHFGI 332
           D++EP+LIQ GYLQRTPRGR+ TD A+ H G+
Sbjct: 298 DIIEPYLIQCGYLQRTPRGRLLTDHAFRHLGL 329