Pairwise Alignments

Query, 334 a.a., Holliday junction branch migration DNA helicase RuvB from Vibrio cholerae E7946 ATCC 55056

Subject, 349 a.a., holliday junction ATP-dependent DNA helicase RuvB from Phaeobacter inhibens DSM 17395

 Score =  391 bits (1004), Expect = e-113
 Identities = 195/332 (58%), Positives = 248/332 (74%)

Query: 1   MIEADRLIAPISNHFKDEEVIDRAIRPKKLADYQGQDHVRDQMEIFIQAAQMRQEALDHL 60
           MI+AD  + P           DRA+RP+ L ++ GQ   R  + +FI++A+ R EA+DH 
Sbjct: 7   MIDADPTLRPTPLPEDSAAENDRALRPQGLGEFIGQAEARANLRVFIESARRRGEAMDHT 66

Query: 61  LIFGPPGLGKTTLANIVANEMGVNIRTTSGPVLEKAGDLAALLTNLEENDVLFIDEIHRL 120
           L  GPPGLGKTTLA IVA E+GVN R TSGPVL KAGDLAA+LTNLE  DVLFIDEIHRL
Sbjct: 67  LFHGPPGLGKTTLAQIVARELGVNFRMTSGPVLAKAGDLAAILTNLESRDVLFIDEIHRL 126

Query: 121 SPMVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIV 180
           +P VEEVLYPAMED++LD++IGEGPAAR+++I+L PFTL+GATTR G LT+PLRDRFGI 
Sbjct: 127 NPAVEEVLYPAMEDFELDLVIGEGPAARTVRIELQPFTLVGATTRMGLLTTPLRDRFGIP 186

Query: 181 QRLEYYKVADLQHIVQRSAQCLGLSMDSEGALEVARRARGTPRIANRLLRRVRDYAEVKG 240
            RL++Y V +L  IV R+A+ LG   D +GA E+ARRARGTPRIA RLLRRV D+A V+G
Sbjct: 187 TRLQFYTVDELFEIVSRNARKLGAPADDDGAREIARRARGTPRIAGRLLRRVVDFAVVEG 246

Query: 241 DGHICAQTADRALNMLDVDHQGFDYMDRKLLLAIMEKFSGGPVGIDNLAAAIGEEKDTIE 300
           DG I  + AD AL  L VD  G D  DR+ L  + E + GGPVGI+ ++AA+ E +D +E
Sbjct: 247 DGTITRELADGALTRLGVDQLGLDGADRRYLRMVAENYGGGPVGIETMSAALSESRDALE 306

Query: 301 DVLEPFLIQQGYLQRTPRGRIATDRAYLHFGI 332
           +V+EP+L+QQG +QRTPRGR+   +A+ H G+
Sbjct: 307 EVIEPYLLQQGLIQRTPRGRMLAHKAWTHLGL 338