Pairwise Alignments

Query, 334 a.a., Holliday junction branch migration DNA helicase RuvB from Vibrio cholerae E7946 ATCC 55056

Subject, 440 a.a., replication-associated recombination protein A from Phaeobacter inhibens DSM 17395

 Score = 68.2 bits (165), Expect = 4e-16
 Identities = 62/219 (28%), Positives = 101/219 (46%), Gaps = 36/219 (16%)

Query: 25  IRPKKLADYQGQDHVRDQMEIFIQAAQMRQEALDHLLIFGPPGLGKTTLANIVANE---- 80
           +RP+ LA+  GQ  V  +         +   +L  L+ +GPPG+GKTT+A ++A E    
Sbjct: 28  LRPQSLAEVIGQAQVLGEDAPL--GVMLASGSLSSLIFWGPPGVGKTTIARLLARETDLH 85

Query: 81  -MGVNIRTTSGPVLEKAGDLAALLTNLEENDVLFIDEIHRLSPMVEEVLYPAMEDYQLDI 139
            + ++   T  P L+K  + A +     +  +LF+DEIHR +   ++   P MED  +  
Sbjct: 86  FVQISAIFTGVPDLKKVFEAAKIRRQNGQGTLLFVDEIHRFNKAQQDGFLPHMEDGTI-- 143

Query: 140 MIGEGPAARSIKIDLPPFTLIGATTRAGS--LTSPLRDRFGIVQRLEYYKVADLQHIVQR 197
                              L+GATT   S  L + +  R  ++  LE   +ADL+ + QR
Sbjct: 144 ------------------LLVGATTENPSFELNAAVLSRAQVLV-LERLSLADLERLTQR 184

Query: 198 SAQ----CLGLSMDSEGALEVARRARGTPRIANRLLRRV 232
           + Q     L L+ D+  AL+    A G  R    L+ +V
Sbjct: 185 AEQELDRALPLTADARDALQ--EMADGDGRALLNLIEQV 221