Pairwise Alignments

Query, 334 a.a., Holliday junction branch migration DNA helicase RuvB from Vibrio cholerae E7946 ATCC 55056

Subject, 432 a.a., AAA ATPase from Dechlorosoma suillum PS

 Score = 50.1 bits (118), Expect = 1e-10
 Identities = 63/252 (25%), Positives = 97/252 (38%), Gaps = 36/252 (14%)

Query: 25  IRPKKLADYQGQDHVRDQMEIFIQAAQMRQEALDHLLIFGPPGLGKTTLANIVANEMGVN 84
           +RP+   +  GQ H+    +    A +  Q     ++++GPPG+GKTTLA ++A +    
Sbjct: 11  LRPRAPDEVIGQQHLLGPGKPLRLAFESGQP--HSMILWGPPGVGKTTLARMMATQFNCE 68

Query: 85  IRTTSG-----PVLEKAGDLAALLTNLEENDVLFIDEIHRLSPMVEEVLYPAMEDYQLDI 139
               S        + +A   A +     +  +LF+DEIHR +   ++   P +E      
Sbjct: 69  FIALSAVFSGIKEVREAVAQAEMWKAQGKRTILFVDEIHRFNKAQQDGFLPFVES----- 123

Query: 140 MIGEGPAARSIKIDLPPFTLIGATTRAGS--LTSPLRDRFGIVQRLEYYKVADLQHIVQR 197
                            FT IGATT   S  + S L  R   V  L+    A++  +  R
Sbjct: 124 ---------------GLFTFIGATTENPSFEVNSALLSR-ASVYVLKSLDEAEMGQLFDR 167

Query: 198 SAQ--CLGLSMDSEGALEVARRARGTPRIANRLLRRVRDYAE----VKGDGHICAQTADR 251
           +       L  D E    +   A G  R    LL +VR  A      K DG     T  +
Sbjct: 168 ARDKALAELDFDDEARTRLIGLADGDARRFLNLLEQVRTAARTARLAKVDGAFIEATMAQ 227

Query: 252 ALNMLDVDHQGF 263
           +L   D     F
Sbjct: 228 SLRRFDKGGDAF 239