Pairwise Alignments

Query, 334 a.a., Holliday junction branch migration DNA helicase RuvB from Vibrio cholerae E7946 ATCC 55056

Subject, 452 a.a., Conserved hypothetical alanine leucine valine rich protein from Mycobacterium tuberculosis H37Rv

 Score = 55.8 bits (133), Expect = 2e-12
 Identities = 65/262 (24%), Positives = 114/262 (43%), Gaps = 48/262 (18%)

Query: 25  IRPKKLADYQGQDHVRDQMEIFIQAAQMRQ----EALDHLLIFGPPGLGKTTLANIVANE 80
           +RP  L +  GQDH      +    + +R+      +  ++++GPPG GKTTLA +++  
Sbjct: 35  MRPASLDEVVGQDH------LLAPGSPLRRLVEGSGVASVILYGPPGSGKTTLAALISQA 88

Query: 81  MGVNIRTTSGPVLEKAGDLAALLTNLE------ENDVLFIDEIHRLSPMVEEVLYPAMED 134
            G      S  +     ++ A++ N        E  VLFIDE+HR S   ++ L  A+E 
Sbjct: 89  TGRRFEALSA-LSAGVKEVRAVIENSRKALLHGEQTVLFIDEVHRFSKTQQDALLSAVEH 147

Query: 135 YQLDIMIGEGPAARSIKIDLPPFTLIGATTR--AGSLTSPLRDRFGIVQRLEYYKVADLQ 192
             +                     L+ ATT   + S+ +PL  R  ++ +L      D +
Sbjct: 148 RVV--------------------LLVAATTENPSFSVVAPLLSR-SLILQLRPLTAEDTR 186

Query: 193 HIVQRS---AQCLG--LSMDSEGALEVARRARGTPRIANRLLRRVRDYAEVKGDGHICAQ 247
            +VQR+    + LG  +++  E    + + A G  R A   L    + A+  G+  +  Q
Sbjct: 187 AVVQRAIDDPRGLGRAVAVAPEAVDLLVQLAAGDARRALTALEVAAEAAQAAGE-LVSVQ 245

Query: 248 TADRALNMLDV--DHQGFDYMD 267
           T +R+++   V  D  G  + D
Sbjct: 246 TIERSVDKAAVRYDRDGDQHYD 267