Pairwise Alignments

Query, 334 a.a., Holliday junction branch migration DNA helicase RuvB from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., Holliday junction DNA helicase RuvB (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  390 bits (1003), Expect = e-113
 Identities = 188/312 (60%), Positives = 244/312 (78%)

Query: 21  IDRAIRPKKLADYQGQDHVRDQMEIFIQAAQMRQEALDHLLIFGPPGLGKTTLANIVANE 80
           +D  +RP+ L D+ GQD +R  +++F+ AA  R +A+DHLL +G PGLGKTTLA I+A E
Sbjct: 21  MDENVRPRSLDDFIGQDELRANLKVFVAAALERGQAMDHLLFYGNPGLGKTTLAQIIAAE 80

Query: 81  MGVNIRTTSGPVLEKAGDLAALLTNLEENDVLFIDEIHRLSPMVEEVLYPAMEDYQLDIM 140
           +GVN+ +TSGPVLE++GDLAA+LTNL  +D+LF+DEIHR+   VEEVLYPA+ED++LD++
Sbjct: 81  LGVNLVSTSGPVLERSGDLAAILTNLGRHDILFVDEIHRMPVAVEEVLYPALEDFKLDLV 140

Query: 141 IGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIVQRLEYYKVADLQHIVQRSAQ 200
           IG+GP AR++KIDL PFTL+GATTR G L+SPLRDRFGI+ RLE+Y  ADL  IV R+A+
Sbjct: 141 IGQGPGARTVKIDLEPFTLVGATTRIGLLSSPLRDRFGIISRLEFYSPADLARIVTRTAR 200

Query: 201 CLGLSMDSEGALEVARRARGTPRIANRLLRRVRDYAEVKGDGHICAQTADRALNMLDVDH 260
            LG ++  EGA+E+ RR+RGTPRIANRLLRRVRD+A V G+G I  + A  AL  +DVD 
Sbjct: 201 ILGANLTPEGAVEIGRRSRGTPRIANRLLRRVRDFAAVHGNGTITPEQASAALGRMDVDE 260

Query: 261 QGFDYMDRKLLLAIMEKFSGGPVGIDNLAAAIGEEKDTIEDVLEPFLIQQGYLQRTPRGR 320
            G D MDRKLL  ++E F GGPVG+  LA A  EE  TIED+ EP+LIQ G+L+RTPRGR
Sbjct: 261 SGLDQMDRKLLSVLIEHFGGGPVGVKTLAVACSEEVRTIEDIYEPYLIQCGFLKRTPRGR 320

Query: 321 IATDRAYLHFGI 332
           +AT +AY H  +
Sbjct: 321 VATAKAYRHLNL 332