Pairwise Alignments

Query, 334 a.a., Holliday junction branch migration DNA helicase RuvB from Vibrio cholerae E7946 ATCC 55056

Subject, 447 a.a., recombination factor protein RarA from Klebsiella michiganensis M5al

 Score = 60.8 bits (146), Expect = 6e-14
 Identities = 61/233 (26%), Positives = 96/233 (41%), Gaps = 37/233 (15%)

Query: 25  IRPKKLADYQGQDHVRDQMEIFIQAAQMRQEALDHLLIFGPPGLGKTTLANIVANEMGVN 84
           +RP+ LA Y GQ H+    +   +A +     L  ++++GPPG GKTTLA ++A     +
Sbjct: 20  MRPENLAQYIGQQHLLAPGKPLPRAIEAGH--LHSMILWGPPGTGKTTLAEVIARYASAD 77

Query: 85  IR----TTSG-PVLEKAGDLAALLTNLEENDVLFIDEIHRLSPMVEEVLYPAMEDYQLDI 139
           +      TSG   + +A + A    N     +LF+DE+HR +   ++   P +ED  +  
Sbjct: 78  VERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTI-- 135

Query: 140 MIGEGPAARSIKIDLPPFTLIGATTRAGS--LTSPLRDRFGIVQRLEYYKVADLQHIVQ- 196
                             T IGATT   S  L S L  R   V  L+     D++ ++  
Sbjct: 136 ------------------TFIGATTENPSFELNSALLSR-ARVYLLKSLTSDDIEQVLSQ 176

Query: 197 ------RSAQCLGLSMDSEGALEVARRARGTPRIANRLLRRVRDYAEVKGDGH 243
                 R      + +  E    +A    G  R A   L  + D AE    G+
Sbjct: 177 AMSDKTRGYGGQNIVLPDETRKAIADLVNGDARRALNTLEMMADMAESDASGN 229