Pairwise Alignments

Query, 334 a.a., Holliday junction branch migration DNA helicase RuvB from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., replication-associated recombination protein A from Dyella japonica UNC79MFTsu3.2

 Score = 57.8 bits (138), Expect = 5e-13
 Identities = 68/244 (27%), Positives = 103/244 (42%), Gaps = 42/244 (17%)

Query: 25  IRPKKLADYQGQDHVRDQMEIFIQAAQMRQEALDHLLIFGPPGLGKTTLANIVANEMGVN 84
           +RP+ L +  GQ  V    +   +A +  +  +  ++++GPPG GKTTLA +VA     +
Sbjct: 24  MRPRSLDEIVGQQRVLAPGKALRRALEAGR--VHSMVLWGPPGCGKTTLALLVARYADAD 81

Query: 85  IRTTSGPVLEKAGDLAALLTNLEEN------DVLFIDEIHRLSPMVEEVLYPAMEDYQLD 138
            R  S  VL    ++   L   E N       VLF+DE+HR +   ++   P +E     
Sbjct: 82  FRAISA-VLSGLPEVRKALAEAEANFAQGRRTVLFVDEVHRFNKAQQDAFLPHIE----- 135

Query: 139 IMIGEGPAARSIKIDLPPFTLIGATTRAGS--LTSPLRDRFGIVQRLEYYKVADLQHIVQ 196
                    R + I       +GATT   S  L S L  R   V  LE     D+   ++
Sbjct: 136 ---------RGVII------FVGATTENPSFELNSALLSRCR-VHVLEAVSADDIVGALK 179

Query: 197 RSAQCL-------GLSMDSEGALEVARRARGTPRIANRLLRRVRDYAEVKGDGHICAQTA 249
           R+ +         GL++       +AR A G  R A  LL    + AE   DG I   T 
Sbjct: 180 RALEDAERGLGGQGLTVSDASLQLIARAADGDVRRALTLLEIAAELAE---DGRIGEATL 236

Query: 250 DRAL 253
           ++ L
Sbjct: 237 EQVL 240