Pairwise Alignments

Query, 334 a.a., Holliday junction branch migration DNA helicase RuvB from Vibrio cholerae E7946 ATCC 55056

Subject, 320 a.a., Holliday junction DNA helicase RuvB (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  387 bits (995), Expect = e-112
 Identities = 187/312 (59%), Positives = 243/312 (77%)

Query: 21  IDRAIRPKKLADYQGQDHVRDQMEIFIQAAQMRQEALDHLLIFGPPGLGKTTLANIVANE 80
           +D ++RP+ L D+ GQD +R  M +++ AA+ R +A+DH+L +G PGLGKTTLA I+A E
Sbjct: 7   LDESVRPRLLDDFIGQDELRANMRVYLDAARERGQAMDHVLFYGNPGLGKTTLAQIMAGE 66

Query: 81  MGVNIRTTSGPVLEKAGDLAALLTNLEENDVLFIDEIHRLSPMVEEVLYPAMEDYQLDIM 140
           +GVN+ +TSGPVLE++GDLAA+LTNL  +D+LF+DEIHR+   VEEVLYPAMED++LD++
Sbjct: 67  LGVNLVSTSGPVLERSGDLAAILTNLGRHDLLFVDEIHRMPIAVEEVLYPAMEDFKLDLV 126

Query: 141 IGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIVQRLEYYKVADLQHIVQRSAQ 200
           IG+GP AR++KID+ PFTL+GATTR G L+SPLRDRFGI+ RLEYY  ADL  IV R+A+
Sbjct: 127 IGQGPGARTVKIDVEPFTLVGATTRIGLLSSPLRDRFGIISRLEYYTPADLARIVARTAR 186

Query: 201 CLGLSMDSEGALEVARRARGTPRIANRLLRRVRDYAEVKGDGHICAQTADRALNMLDVDH 260
            +G ++  EGA+E+ RRARGTPRIANRLLRRVRD+A V   G I A  A  AL  ++VD 
Sbjct: 187 IIGANLTEEGAIEIGRRARGTPRIANRLLRRVRDFATVHAGGVISADLASEALGRMEVDE 246

Query: 261 QGFDYMDRKLLLAIMEKFSGGPVGIDNLAAAIGEEKDTIEDVLEPFLIQQGYLQRTPRGR 320
            G D MDRKLL  ++E + GGPVGI  LA A  EE  TIED+ EP+LIQ G+L+RTPRGR
Sbjct: 247 SGLDQMDRKLLEVLIEHYGGGPVGIKTLAVACAEEVRTIEDIYEPYLIQCGFLKRTPRGR 306

Query: 321 IATDRAYLHFGI 332
           +AT +AY H  +
Sbjct: 307 VATAKAYRHLNL 318