Pairwise Alignments

Query, 334 a.a., Holliday junction branch migration DNA helicase RuvB from Vibrio cholerae E7946 ATCC 55056

Subject, 411 a.a., ATPase, AAA family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 67.8 bits (164), Expect = 5e-16
 Identities = 62/219 (28%), Positives = 96/219 (43%), Gaps = 32/219 (14%)

Query: 25  IRPKKLADYQGQDHVRDQMEIFIQAAQMRQEALDHLLIFGPPGLGKTTLANIVANEMGVN 84
           +RP  L  + GQ H+  ++E     A +R   L  LL+FGPPG GK+TLA ++A     N
Sbjct: 11  LRPTVLEGFVGQTHLTQRIE-----ALLRANRLPSLLLFGPPGCGKSTLALLLAKARSAN 65

Query: 85  IRTTSGPVLEKAGDLAALLTNLEENDVLFIDEIHRLSPMVEEVLYPAMEDYQLDIMIGEG 144
           +   S P   +AG L  L   L   D+L +DE+HR S   ++   P +E   +       
Sbjct: 66  VLRLSAP---EAG-LQHLRKQLHGVDILVLDELHRFSKAQQDFFLPLLESGDI------- 114

Query: 145 PAARSIKIDLPPFTLIGATTR--AGSLTSPLRDRFGIVQRLEYYKVADLQHIVQRSAQCL 202
                        T++  TT   + S+T  L  R  ++ RL     A+L  + +R A   
Sbjct: 115 -------------TMLATTTENPSFSVTRQLLSRLHVL-RLRPLGRAELLELGRRGAVAQ 160

Query: 203 GLSMDSEGALEVARRARGTPRIANRLLRRVRDYAEVKGD 241
            + ++ +    +A  + G  R    LL  V    E K D
Sbjct: 161 EVQIEDDVLDLLASMSHGDARTMLNLLEYVAALPEDKRD 199