Pairwise Alignments

Query, 334 a.a., Holliday junction branch migration DNA helicase RuvB from Vibrio cholerae E7946 ATCC 55056

Subject, 354 a.a., holliday junction ATP-dependent DNA helicase RuvB from Burkholderia phytofirmans PsJN

 Score =  478 bits (1231), Expect = e-140
 Identities = 241/339 (71%), Positives = 283/339 (83%), Gaps = 10/339 (2%)

Query: 1   MIEADRLIA-------PISNHFKDEEVIDRAIRPKKLADYQGQDHVRDQMEIFIQAAQMR 53
           MIE D+L A       P+S    +EE  +RA+RP++L +Y GQ+ VR Q+EIFI+AA+ R
Sbjct: 1   MIETDKLAAERIIAATPVS---PNEEAFERALRPRQLEEYVGQEKVRGQLEIFIEAAKRR 57

Query: 54  QEALDHLLIFGPPGLGKTTLANIVANEMGVNIRTTSGPVLEKAGDLAALLTNLEENDVLF 113
            E+LDH+L+FGPPGLGKTTLA+I+A EMGVN+R TSGPVLE+AGDLAALLTNLE NDVLF
Sbjct: 58  SESLDHVLLFGPPGLGKTTLAHIIAREMGVNLRQTSGPVLERAGDLAALLTNLEANDVLF 117

Query: 114 IDEIHRLSPMVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPL 173
           IDEIHRLSP+VEE+LYPA+EDYQ+DIMIGEGPAARS+K+DL PFTL+GATTRAG LT+PL
Sbjct: 118 IDEIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSVKLDLQPFTLVGATTRAGMLTNPL 177

Query: 174 RDRFGIVQRLEYYKVADLQHIVQRSAQCLGLSMDSEGALEVARRARGTPRIANRLLRRVR 233
           RDRFGIV RLE+Y   +L  IV RSA  L   +  +GA E+A+RARGTPRIANRLLRRVR
Sbjct: 178 RDRFGIVARLEFYNAEELARIVTRSASLLNAQIHPDGAFEIAKRARGTPRIANRLLRRVR 237

Query: 234 DYAEVKGDGHICAQTADRALNMLDVDHQGFDYMDRKLLLAIMEKFSGGPVGIDNLAAAIG 293
           D+AEVK DG+I AQ AD AL MLDVD  GFD MDRKLL AI+ KF GGPVG+DNLAAAIG
Sbjct: 238 DFAEVKADGNITAQVADAALKMLDVDAVGFDLMDRKLLEAILHKFDGGPVGVDNLAAAIG 297

Query: 294 EEKDTIEDVLEPFLIQQGYLQRTPRGRIATDRAYLHFGI 332
           EE+DTIEDVLEP+LIQQG+LQRTPRGR+AT   Y HFG+
Sbjct: 298 EERDTIEDVLEPYLIQQGFLQRTPRGRVATLLTYRHFGL 336