Pairwise Alignments

Query, 334 a.a., Holliday junction branch migration DNA helicase RuvB from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., recombination factor protein RarA (RefSeq) from Shewanella sp. ANA-3

 Score = 59.7 bits (143), Expect = 1e-13
 Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 10/129 (7%)

Query: 13  NHFKDEEVIDRAIRPKKLADYQGQDHVRDQMEIFIQAAQMRQEALDHLLIFGPPGLGKTT 72
           N   D   +   +RP+ +A+Y GQ H+  + +   QA +  +     ++++GPPG GKTT
Sbjct: 7   NFAPDFRPLAARMRPRTIAEYIGQAHLLGEGQPLRQALEAGRA--HSMMLWGPPGTGKTT 64

Query: 73  LANIVANEMGVNIRTTSGPVLEKAGDLAALLTNLE-------ENDVLFIDEIHRLSPMVE 125
           LA ++A+    ++   S  V     D+ A +   +       +  +LF+DE+HR +   +
Sbjct: 65  LAELIAHYSNAHVERISA-VTSGVKDIRAAIEQAQAVAQSRGQRTLLFVDEVHRFNKSQQ 123

Query: 126 EVLYPAMED 134
           +   P +ED
Sbjct: 124 DAFLPFIED 132