Pairwise Alignments

Query, 334 a.a., Holliday junction branch migration DNA helicase RuvB from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., Holliday junction DNA helicase RuvB (RefSeq) from Shewanella sp. ANA-3

 Score =  509 bits (1310), Expect = e-149
 Identities = 257/334 (76%), Positives = 297/334 (88%), Gaps = 2/334 (0%)

Query: 1   MIEADRLIAPISNHFKDEEVIDRAIRPKKLADYQGQDHVRDQMEIFIQAAQMRQEALDHL 60
           MIEADRLI P       ++VIDRA+RPK L +Y GQD  R Q+++FIQAA+ R+EALDH+
Sbjct: 1   MIEADRLIQPQLQG--QDDVIDRAMRPKLLDEYTGQDDTRAQLKVFIQAAKNREEALDHM 58

Query: 61  LIFGPPGLGKTTLANIVANEMGVNIRTTSGPVLEKAGDLAALLTNLEENDVLFIDEIHRL 120
           LI+GPPGLGKTTLA IVANEMGVNI++TSGPVLEKAGDLAALLTNLE  DVLFIDEIHRL
Sbjct: 59  LIYGPPGLGKTTLAMIVANEMGVNIKSTSGPVLEKAGDLAALLTNLEAGDVLFIDEIHRL 118

Query: 121 SPMVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIV 180
           SP+VEE+LYPAMEDYQLDIMIGEGPAARSIK+DLPPFTL+GATTRAG+LTSPLR RFGI 
Sbjct: 119 SPVVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGALTSPLRARFGIP 178

Query: 181 QRLEYYKVADLQHIVQRSAQCLGLSMDSEGALEVARRARGTPRIANRLLRRVRDYAEVKG 240
            RLE+Y V DL  IV RSAQ +GL++DSEGA E+A+R+RGTPRIANRLLRRVRDYAEVK 
Sbjct: 179 LRLEFYNVKDLSTIVTRSAQVMGLAIDSEGATEIAKRSRGTPRIANRLLRRVRDYAEVKH 238

Query: 241 DGHICAQTADRALNMLDVDHQGFDYMDRKLLLAIMEKFSGGPVGIDNLAAAIGEEKDTIE 300
           DG +  + A++AL++LDVD +GFDYMDRKLLLAI++KF GGPVG+DNLAAAIGEE++TIE
Sbjct: 239 DGAVTQKVAEQALDLLDVDGEGFDYMDRKLLLAIIDKFMGGPVGLDNLAAAIGEERETIE 298

Query: 301 DVLEPFLIQQGYLQRTPRGRIATDRAYLHFGIEK 334
           DVLEPFLIQQG++QRTPRGRIAT RAYLHFG+ K
Sbjct: 299 DVLEPFLIQQGFIQRTPRGRIATTRAYLHFGMIK 332