Pairwise Alignments

Query, 541 a.a., cytochrome d terminal oxidase subunit 1 from Vibrio cholerae E7946 ATCC 55056

Subject, 483 a.a., cytochrome ubiquinol oxidase subunit I from Synechocystis sp000284455 PCC 6803

 Score =  222 bits (565), Expect = 3e-62
 Identities = 125/311 (40%), Positives = 174/311 (55%), Gaps = 6/311 (1%)

Query: 16  DVVDLSRLQFALTAMYHFLFVPLTLGMAFLLAIMESLYVMTDKQIYKDMTKFWGKLFGIN 75
           + V LSRLQFA+TA++H L+  LT GM   L I+E L++ T    Y    +FW +L+ +N
Sbjct: 7   NTVALSRLQFAVTAIFHMLWPVLTTGMGIYLVIIEGLWLKTRNLDYYHHARFWARLYVLN 66

Query: 76  FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEALVAFFLESTFVGLFFFGWDRLS 135
           F +GVATGL M FQFG NW+ +S  VGD FG  L  E  +AF LE++F+G+  FGWDR+ 
Sbjct: 67  FGIGVATGLPMAFQFGLNWAPFSESVGDFFGTVLGFEGTMAFMLEASFLGIMLFGWDRVP 126

Query: 136 KRQHLVVTWLVALGSNFSALWILVANGWMQNPVGSEFNFETMRMEMVSFADVVLNPVAQV 195
              H + T LVA+G+N S  WIL AN W+Q P G    F   +  +  +   + NP    
Sbjct: 127 PLIHYLATILVAIGANLSTFWILSANSWLQTPAGG--IFVDGKFVVQDYFAAIANPFMVN 184

Query: 196 KFVHTVAAGYTTGAMFILGISAYYLLKGRDVAFARRSFAIAASFGMASVLSVIVLGDESG 255
            F+H   A   T    I GISA+ +L GR   F  RS  +     MA     I +G  S 
Sbjct: 185 SFLHMFFATLETSMFVIGGISAWCILTGRQPQFFARSLQVILVVVMAVAPLQIFIGHLSA 244

Query: 256 YELGEVQRVKLAAIESEWHTEPA--PAAFTLFGIPNQEEMRTDYAIKIPFALGII--ATR 311
            ++   Q  KLAA+E+ W T PA  PAA+++  +PN +  + D+ + IP AL  I     
Sbjct: 245 EQVSVHQPAKLAAMEALWETVPAKTPAAWSVVALPNDKAEKNDWELSIPGALSYILELKP 304

Query: 312 SLDEQVVGLRD 322
            LD+ + GL+D
Sbjct: 305 QLDKPIQGLKD 315



 Score = 95.1 bits (235), Expect = 5e-24
 Identities = 59/156 (37%), Positives = 82/156 (52%), Gaps = 8/156 (5%)

Query: 364 LGYGLLLKRYTDKVTDATEEQIQAAADDSIPTVWPLFWSFRIMVACGFIMLVVFGAAFIQ 423
           L Y L LK   DK     ++    A  D    V  +++SFRIMVA G     +     +Q
Sbjct: 296 LSYILELKPQLDKPIQGLKDW---APVDRPRMVGLIYYSFRIMVAIGLFFAALMAVTVLQ 352

Query: 424 TCRQK-----IEQKKWVLKAALFSIPLPWIAVETGWFVAEYGRQPWAVGEILPVNVAASA 478
             R K     I Q+KW+L+A +F+ PL ++AVETGW V   GRQPW V   +    +AS 
Sbjct: 353 WLRGKLKPEIISQQKWLLRAWVFAAPLGYLAVETGWIVRCVGRQPWIVYGEMRTAESASN 412

Query: 479 LSAGEIITSMLAILALYTIFLIAEVYLMVKFTRKGP 514
           L  GEI+ S+  +  +Y +FLIA +Y   +  R GP
Sbjct: 413 LPPGEILFSLTGLSVMYIVFLIATLYFGSRIIRNGP 448