Pairwise Alignments

Query, 541 a.a., cytochrome d terminal oxidase subunit 1 from Vibrio cholerae E7946 ATCC 55056

Subject, 493 a.a., quinol oxidase subunit I transmembrane protein from Sinorhizobium meliloti 1021

 Score =  211 bits (537), Expect = 5e-59
 Identities = 112/313 (35%), Positives = 173/313 (55%), Gaps = 5/313 (1%)

Query: 16  DVVDLSRLQFALTAMYHFLFVPLTLGMAFLLAIMESLYVMTDKQIYKDMTKFWGKLFGIN 75
           D   L+R+QFA T  +H +F   ++G+A  LA++E+L++    ++Y ++  FW  +F + 
Sbjct: 29  DATVLARIQFAFTVSFHIIFPAFSIGLASYLAVLEALWLWKKDEVYLELFNFWKTIFAVA 88

Query: 76  FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEALVAFFLESTFVGLFFFGWDRLS 135
           F +GV +G+ M +QFGTNWS +S   G + G  +  E L AFFLE+ F+G+  FG +R+ 
Sbjct: 89  FGMGVVSGIVMSYQFGTNWSVFSDKAGPVIGPLMGYEVLTAFFLEAGFLGVMLFGLNRVG 148

Query: 136 KRQHLVVTWLVALGSNFSALWILVANGWMQNPVGSEFNFETMRMEMVSFADVVLNPVAQV 195
            + H   T +VALG+  SA WIL  N WMQ P G   N E  +     +  V+ NP    
Sbjct: 149 PKLHFFATAMVALGTLISATWILAVNSWMQTPAGFSVN-EAGQFIPDDWWAVIFNPSFPY 207

Query: 196 KFVHTVAAGYTTGAMFILGISAYYLLKGRDVAFARRSFAIAASFGMASVLSVIVL--GDE 253
           +  H V A Y T A  +    A++LL+      AR  F++A    MA++++ I +  GD+
Sbjct: 208 RLTHMVLAAYLTTAFVVGACGAWHLLRKTAPRRARTMFSMA--MWMAAIVAPIQIFAGDQ 265

Query: 254 SGYELGEVQRVKLAAIESEWHTEPAPAAFTLFGIPNQEEMRTDYAIKIPFALGIIATRSL 313
            G    E Q  K+ A+E  + + P  A   LFG+PN  E R DYA++IP    +I   SL
Sbjct: 266 HGLNTLEHQPAKVMAMEGHYQSHPEGAPLILFGMPNSAEKRVDYALEIPKLSSLILKHSL 325

Query: 314 DEQVVGLRDLRDE 326
           D  + GL  + ++
Sbjct: 326 DAPLAGLDTIPED 338



 Score = 61.2 bits (147), Expect = 9e-14
 Identities = 38/136 (27%), Positives = 67/136 (49%)

Query: 379 DATEEQIQAAADDSIPTVWPLFWSFRIMVACGFIMLVVFGAAFIQTCRQKIEQKKWVLKA 438
           DA    +    +D  P V  +FWSFR+MVA GF ML +   +     R  ++    + +A
Sbjct: 326 DAPLAGLDTIPEDRHPPVAIVFWSFRVMVAIGFAMLGLGLWSLWCRLRGTLDTNAALHRA 385

Query: 439 ALFSIPLPWIAVETGWFVAEYGRQPWAVGEILPVNVAASALSAGEIITSMLAILALYTIF 498
           A+   P  ++AV  GW   E GRQP+ +   L    + S ++A  +  S++A + +Y + 
Sbjct: 386 AVLMGPAGFVAVLAGWITTEVGRQPYTIYGHLLTADSISPIAAPAVGASLVAFIIVYFLV 445

Query: 499 LIAEVYLMVKFTRKGP 514
             A  + +++   + P
Sbjct: 446 FGAGTFYILRLMARLP 461