Pairwise Alignments

Query, 541 a.a., cytochrome d terminal oxidase subunit 1 from Vibrio cholerae E7946 ATCC 55056

Subject, 518 a.a., cytochrome bd-I oxidase subunit I (RefSeq) from Shewanella amazonensis SB2B

 Score =  815 bits (2105), Expect = 0.0
 Identities = 397/511 (77%), Positives = 449/511 (87%)

Query: 16  DVVDLSRLQFALTAMYHFLFVPLTLGMAFLLAIMESLYVMTDKQIYKDMTKFWGKLFGIN 75
           +VV+LSRLQFALTAMYHFLFVPLTLGMAFLLAIMESLYVMT+KQIYKDMTKFWGKLFGIN
Sbjct: 5   EVVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMESLYVMTNKQIYKDMTKFWGKLFGIN 64

Query: 76  FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEALVAFFLESTFVGLFFFGWDRLS 135
           FALGV TGL MEFQFGTNWSYYSHYVGDIFGAPLAIE L+AFFLESTFVG+FFFGWDR S
Sbjct: 65  FALGVTTGLAMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGMFFFGWDRFS 124

Query: 136 KRQHLVVTWLVALGSNFSALWILVANGWMQNPVGSEFNFETMRMEMVSFADVVLNPVAQV 195
           KRQHL VTWL+ALG+N SALWILVANGWMQNPVGS FN+ETMRMEM SFA+VV NPVAQV
Sbjct: 125 KRQHLTVTWLMALGTNMSALWILVANGWMQNPVGSVFNYETMRMEMTSFAEVVFNPVAQV 184

Query: 196 KFVHTVAAGYTTGAMFILGISAYYLLKGRDVAFARRSFAIAASFGMASVLSVIVLGDESG 255
           KFVHTVA+GY  GAMF+L ISAYY+LK RD+ FARRSFAIAASFGMAS+LSVIVLGDESG
Sbjct: 185 KFVHTVASGYVAGAMFVLAISAYYILKKRDLPFARRSFAIAASFGMASILSVIVLGDESG 244

Query: 256 YELGEVQRVKLAAIESEWHTEPAPAAFTLFGIPNQEEMRTDYAIKIPFALGIIATRSLDE 315
           Y++GEVQRVKLAA+E+EWHTEPAPA+FT+ G PNQE M TD AIKIP+A+GIIATRSLDE
Sbjct: 245 YKVGEVQRVKLAAVEAEWHTEPAPASFTVVGFPNQETMHTDGAIKIPYAMGIIATRSLDE 304

Query: 316 QVVGLRDLRDEHVERIRTGIYAYDLLERLRAGEKTPENMAAFDEVKHDLGYGLLLKRYTD 375
           +V GLRDL DEH  RIR G+ AY +LE LRAG K PE  AAF+E K DLGYGLLLKRYTD
Sbjct: 305 EVTGLRDLVDEHEVRIRNGMKAYAMLEELRAGNKDPELKAAFEEAKIDLGYGLLLKRYTD 364

Query: 376 KVTDATEEQIQAAADDSIPTVWPLFWSFRIMVACGFIMLVVFGAAFIQTCRQKIEQKKWV 435
           KV DATEEQI+AAA DSIP+V PLFWSFR+MV  G IML VF AAF Q+ R +IE+KKWV
Sbjct: 365 KVVDATEEQIKAAAKDSIPSVAPLFWSFRVMVGLGVIMLFVFAAAFWQSTRHRIEEKKWV 424

Query: 436 LKAALFSIPLPWIAVETGWFVAEYGRQPWAVGEILPVNVAASALSAGEIITSMLAILALY 495
           LKAAL+S+PLPWIA+E GWFVAEYGRQPW + E+LP  ++AS+L+  ++  S+ +I   Y
Sbjct: 425 LKAALYSLPLPWIAIECGWFVAEYGRQPWTISEVLPTFMSASSLNPSDLWFSIASITLFY 484

Query: 496 TIFLIAEVYLMVKFTRKGPSSLKTGRYHFEQ 526
           ++ L+ E++LM K+ R GPSSLKTGRYHFE+
Sbjct: 485 SVLLVIELFLMFKYARLGPSSLKTGRYHFEK 515