Pairwise Alignments

Query, 541 a.a., cytochrome d terminal oxidase subunit 1 from Vibrio cholerae E7946 ATCC 55056

Subject, 516 a.a., cytochrome ubiquinol oxidase subunit I from Parabacteroides merdae CL09T00C40

 Score =  408 bits (1048), Expect = e-118
 Identities = 224/526 (42%), Positives = 312/526 (59%), Gaps = 47/526 (8%)

Query: 17  VVDLSRLQFALTAMYHFLFVPLTLGMAFLLAIMESLYVMTDKQIYKDMTKFWGKLFGINF 76
           ++D SR QFALTAMYH+LFVPLTLG+  + AIME++Y  T  + +K   +FW KLFGINF
Sbjct: 9   LIDWSRAQFALTAMYHWLFVPLTLGLGVIQAIMETIYYKTGNEFWKKTAQFWMKLFGINF 68

Query: 77  ALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEALVAFFLESTFVGLFFFGWDRLSK 136
           A+GVATGL +EF+FGTNWS YS +VGDIFGAPLAIE ++AFF+E+TF+ + FFGWD++SK
Sbjct: 69  AIGVATGLILEFEFGTNWSNYSWFVGDIFGAPLAIEGILAFFMEATFIAVMFFGWDKVSK 128

Query: 137 RQHLVVTWLVALGSNFSALWILVANGWMQNPVGSEFNFETMRMEMVSFADVVLNPVAQVK 196
           R HL  TWL  +G+  SALWIL+AN WMQ PVG  FN +T+R EM  F  V L+PVA  K
Sbjct: 129 RFHLASTWLTIIGATLSALWILIANAWMQYPVGMHFNPDTVRNEMFDFWAVALSPVAINK 188

Query: 197 FVHTVAAGYTTGAMFILGISAYYLLKGRDVAFARRSFAIAASFGMASVLSVIVLGDESGY 256
           F HTV +G+  GA+F++G+S++YLLK R+  F+  S  + A FG+ + + ++  GD S Y
Sbjct: 189 FFHTVLSGWIVGAVFVMGVSSWYLLKKRETEFSLESIKVGAVFGLVASILIVWTGDGSAY 248

Query: 257 ELGEVQRVKLAAIESEWHTEPAPAAFTLFGIPNQEEMRTDYA---------IKIPFALGI 307
           ++ + Q +KLAA+E  +            G+ N +  +T Y          IKIP  L  
Sbjct: 249 QVAQKQPMKLAAMEGLYEGGNG-TGLVAIGLLNPD--KTSYKDNVNPFIFDIKIPKLLSF 305

Query: 308 IATRSLDEQVVGLRDLRD------------EHVERIRTGIYAYDLLERLRAGEKTPENMA 355
           +A R +D  V G+ +L +               E+I  G  A   L   R   K  + +A
Sbjct: 306 LAERDVDAYVPGIVNLIEGGYTTNKGTVALSAAEKIEKGRIAIQALADYRKAVKDKDQVA 365

Query: 356 A------FDEVKHDLGYGLLLKRYTDKVTDATEEQIQAAADDSIPTVWPLFWSFRIMVAC 409
           A       DE     GYG +                     D +P V   F+SFR+MV  
Sbjct: 366 AEQARSLLDENFAYFGYGYI-----------------KDPADLVPHVGLTFYSFRVMVLL 408

Query: 410 GFIMLVVFGAAFIQTCRQKIEQKKWVLKAALFSIPLPWIAVETGWFVAEYGRQPWAVGEI 469
           G   +++F  A I + + K    +W+  A+L++IPL +IA + GW VAE GRQPWA+ +I
Sbjct: 409 GGYFILLFIVALIWSKKNKFADARWLQWASLWTIPLAYIAGQAGWIVAEVGRQPWAIQDI 468

Query: 470 LPVNVAASALSAGEIITSMLAILALYTIFLIAEVYLMVKFTRKGPS 515
           LP   + S L+   + T+    L L+T+ LIAE+ +MVK  +KGPS
Sbjct: 469 LPTGASVSKLATSSVQTTFFVFLFLFTVLLIAEIGIMVKAIKKGPS 514