Pairwise Alignments

Query, 541 a.a., cytochrome d terminal oxidase subunit 1 from Vibrio cholerae E7946 ATCC 55056

Subject, 515 a.a., cytochrome bd-type quinol oxidase, subunit 1 from Dechlorosoma suillum PS

 Score =  631 bits (1627), Expect = 0.0
 Identities = 309/507 (60%), Positives = 391/507 (77%), Gaps = 2/507 (0%)

Query: 14  MID--VVDLSRLQFALTAMYHFLFVPLTLGMAFLLAIMESLYVMTDKQIYKDMTKFWGKL 71
           MID  VVDLSRLQFA TAMYHFLFVPLTLG+++LL +ME+ YVM+ K+IY+DMTKFWGKL
Sbjct: 1   MIDSTVVDLSRLQFAATAMYHFLFVPLTLGLSWLLVVMETAYVMSGKEIYRDMTKFWGKL 60

Query: 72  FGINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEALVAFFLESTFVGLFFFGW 131
           +GINFALGV TG+TMEFQFGTNW+YYSHYVGDIFGAPLAIE L+AFFLEST VGLFFFGW
Sbjct: 61  YGINFALGVTTGITMEFQFGTNWAYYSHYVGDIFGAPLAIEGLMAFFLESTMVGLFFFGW 120

Query: 132 DRLSKRQHLVVTWLVALGSNFSALWILVANGWMQNPVGSEFNFETMRMEMVSFADVVLNP 191
            RLSK  HL VT L+ALG+N SA+ IL+ANGWMQ+PVGS FN  TMRME+V FA +V NP
Sbjct: 121 QRLSKAGHLAVTVLMALGTNLSAVLILIANGWMQDPVGSTFNPVTMRMELVDFAALVFNP 180

Query: 192 VAQVKFVHTVAAGYTTGAMFILGISAYYLLKGRDVAFARRSFAIAASFGMASVLSVIVLG 251
           VAQ KFVHTVAAGY TG++F+LGIS++YLLKG  V FARRSF IAA+FG+A  LSVIVLG
Sbjct: 181 VAQSKFVHTVAAGYVTGSLFVLGISSWYLLKGLHVEFARRSFRIAAAFGLAGCLSVIVLG 240

Query: 252 DESGYELGEVQRVKLAAIESEWHTEPAPAAFTLFGIPNQEEMRTDYAIKIPFALGIIATR 311
           DESGY + E Q+ KLAAIE+ W TE APA F L   PN+E    D+ I+IP+ LG+IATR
Sbjct: 241 DESGYAVSESQKSKLAAIEAMWETEAAPAGFNLLAWPNEERQANDWEIRIPYVLGLIATR 300

Query: 312 SLDEQVVGLRDLRDEHVERIRTGIYAYDLLERLRAGEKTPENMAAFDEVKHDLGYGLLLK 371
           S+ E + G++++R  + +RI +G+ A   LE LR         A F + + D+GYG+L+K
Sbjct: 301 SVSETLPGIKEIRAANRQRIESGVQAVLALEALRQNPADAAAKATFAKHQQDMGYGMLVK 360

Query: 372 RYTDKVTDATEEQIQAAADDSIPTVWPLFWSFRIMVACGFIMLVVFGAAFIQTCRQKIEQ 431
           RY+  +  AT   +  AA DS+P V PLFW+FR+MV  GF ML++ G AF  + +   +Q
Sbjct: 361 RYSPDLAQATPAMLDQAAHDSVPRVAPLFWTFRLMVLLGFAMLLLVGLAFWYSVKNSFQQ 420

Query: 432 KKWVLKAALFSIPLPWIAVETGWFVAEYGRQPWAVGEILPVNVAASALSAGEIITSMLAI 491
           K W+L+ AL+ IP+PWIA+++GWFVAEYGRQPW V  +LP +++AS+LSA  +  S+   
Sbjct: 421 KTWLLRWALWFIPMPWIAIQSGWFVAEYGRQPWTVFGMLPTHLSASSLSAASLWGSIAGF 480

Query: 492 LALYTIFLIAEVYLMVKFTRKGPSSLK 518
           +  YT+ L+AE+YLM K+ R GP++L+
Sbjct: 481 VGFYTLLLVAEMYLMFKYARLGPAALQ 507