Pairwise Alignments

Query, 541 a.a., cytochrome d terminal oxidase subunit 1 from Vibrio cholerae E7946 ATCC 55056

Subject, 485 a.a., Probable integral membrane cytochrome D ubiquinol oxidase (subunit I) CydA (cytochrome BD-I oxidase subunit I) from Mycobacterium tuberculosis H37Rv

 Score =  258 bits (660), Expect = 3e-73
 Identities = 137/335 (40%), Positives = 207/335 (61%), Gaps = 10/335 (2%)

Query: 15  IDVVDLSRLQFALTAMYHFLFVPLTLGMAFLLAIMESLYVMTDKQIYKDMTKFWGKLFGI 74
           ++VVD+SR QF +T +YHF+FVPLT+G+A L+A+M++L+V+TD   +  +TKF+GKLF I
Sbjct: 1   MNVVDISRWQFGITTVYHFIFVPLTIGLAPLIAVMQTLWVVTDNPAWYRLTKFFGKLFLI 60

Query: 75  NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEALVAFFLESTFVGLFFFGWDRL 134
           NFA+GVATG+  EFQFG NWS YS +VGD+FGAPLA+E L AFF ESTF+GL+ FGW+RL
Sbjct: 61  NFAIGVATGIVQEFQFGMNWSEYSRFVGDVFGAPLAMEGLAAFFFESTFIGLWIFGWNRL 120

Query: 135 SKRQHLVVTWLVALGSNFSALWILVANGWMQNPVGSEFNFETMRMEMVSFADVVLNPVAQ 194
            +  HL   W+VA+  N SA +I+ AN +MQ+PVG+ +N  T R E+ S   ++ N  AQ
Sbjct: 121 PRLVHLACIWIVAIAVNVSAFFIIAANSFMQHPVGAHYNPTTGRAELSSIVVLLTNNTAQ 180

Query: 195 VKFVHTVAAGYTTGAMFILGISAYYLLKGRDV-------AFARRSFAIAASFGMASVLSV 247
             F HTV+    T   F+  +SA++L++           A  R +  +     +A+   +
Sbjct: 181 AAFTHTVSGALLTAGTFVAAVSAWWLVRSSTTHADSDTQAMYRPATILGCWVALAATAGL 240

Query: 248 IVLGDESGYELGEVQRVKLAAIESEWHTEPAPAAFTLFGIPNQEEMRT-DYAIKIPFALG 306
           +  GD  G  + + Q +K+A+ ES   T+  P  F++  +  Q    +    I++P+ L 
Sbjct: 241 LFTGDHQGKLMFQQQPMKMASAESLCDTQTDP-NFSVLTVGRQNNCDSLTRVIEVPYVLP 299

Query: 307 IIAT-RSLDEQVVGLRDLRDEHVERIRTGIYAYDL 340
            +A  R     + G+RDL+ E+ +R     Y  +L
Sbjct: 300 FLAEGRISGVTLQGIRDLQQEYQQRFGPNDYRPNL 334