Pairwise Alignments

Query, 541 a.a., cytochrome d terminal oxidase subunit 1 from Vibrio cholerae E7946 ATCC 55056

Subject, 433 a.a., cytochrome d ubiquinol oxidase, subunit I (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  313 bits (801), Expect = 1e-89
 Identities = 161/312 (51%), Positives = 210/312 (67%), Gaps = 2/312 (0%)

Query: 15  IDVVDLSRLQFALTAMYHFLFVPLTLGMAFLLAIMESLYVMTDKQIYKDMTKFWGKLFGI 74
           +DVV LSRLQFA+   +HF+FVPLTLG++ LLA+ME+LYV T +++YK M KFWGKLF I
Sbjct: 1   MDVVMLSRLQFAVAVFFHFIFVPLTLGLSVLLAVMEALYVRTGEEVYKRMAKFWGKLFLI 60

Query: 75  NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEALVAFFLESTFVGLFFFGWDRL 134
           NFALGV TG+T+EFQFGTNWS YS YVGDIFG+ LAIEA +AFFLESTF+ ++ FGWD++
Sbjct: 61  NFALGVVTGITLEFQFGTNWSRYSEYVGDIFGSLLAIEATLAFFLESTFLAVWAFGWDKV 120

Query: 135 SKRQHLVVTWLVALGSNFSALWILVANGWMQNPVGSEFNFETMRMEMVSFADVVLNPVAQ 194
           SK+ HL     VA  SN SALWI++ANGWMQNPVG  +     R E+ +F  V+ NP A 
Sbjct: 121 SKKVHLFAICAVAFASNMSALWIIIANGWMQNPVG--YVIRNGRAELDNFLTVLSNPFAW 178

Query: 195 VKFVHTVAAGYTTGAMFILGISAYYLLKGRDVAFARRSFAIAASFGMASVLSVIVLGDES 254
            ++ HT+ A +  G  F+LG+SA++LL+  ++ F  RSF IAA F +A  + V V G   
Sbjct: 179 GQYFHTIFASWMLGGFFVLGVSAWHLLRRNEMDFFGRSFRIAAPFTLAFAILVAVQGHSH 238

Query: 255 GYELGEVQRVKLAAIESEWHTEPAPAAFTLFGIPNQEEMRTDYAIKIPFALGIIATRSLD 314
           G  + E+Q  KLAA+ES W T      + L     + E     AI IP  L ++A    D
Sbjct: 239 GNTVAEIQPAKLAAMESHWETGKGVPMYLLAMPDEKNEGNLVQAIGIPKLLSVLAFNDPD 298

Query: 315 EQVVGLRDLRDE 326
            +V GL+D   E
Sbjct: 299 AEVKGLKDFPKE 310



 Score = 98.6 bits (244), Expect = 4e-25
 Identities = 58/176 (32%), Positives = 92/176 (52%), Gaps = 8/176 (4%)

Query: 347 GEKTPENMAAFDEVKHD------LGYGLLLKRYTDKVTDATEEQIQAAADDSIPTVWPLF 400
           G+  P  + A  + K++      +G   LL        DA  + ++    +  P V   F
Sbjct: 260 GKGVPMYLLAMPDEKNEGNLVQAIGIPKLLSVLAFNDPDAEVKGLKDFPKEDRPPVLITF 319

Query: 401 WSFRIMVACGFIMLVVFGAAFIQTCRQKIEQKKWVLKAALFSIPLPWIAVETGWFVAEYG 460
            SFR MV  G +  +V G A++   R++ E+K W+L+   + IPLP+IA+  GW VAE G
Sbjct: 320 LSFRAMVGLGTLFPIVAGLAYLW--RKRPEEKAWLLRVLPWLIPLPYIAIMAGWTVAEVG 377

Query: 461 RQPWAVGEILPVNVAASALSAGEIITSMLAILALYTIFLIAEVYLMVKFTRKGPSS 516
           RQPW V  ++    A S + A  + TS+LA   +YT   + ++YL+ K+  KGP +
Sbjct: 378 RQPWIVHGLMRTTDAVSPVPAASVATSLLAFTVVYTFLGVLDIYLLRKYAIKGPKA 433