Pairwise Alignments

Query, 541 a.a., cytochrome d terminal oxidase subunit 1 from Vibrio cholerae E7946 ATCC 55056

Subject, 530 a.a., cytochrome BD oxidase subunit I from Burkholderia phytofirmans PsJN

 Score =  690 bits (1780), Expect = 0.0
 Identities = 338/514 (65%), Positives = 412/514 (80%), Gaps = 4/514 (0%)

Query: 16  DVVDLSRLQFALTAMYHFLFVPLTLGMAFLLAIMESLYVMTDKQIYKDMTKFWGKLFGIN 75
           +VV+LSRLQFA+TA+YHFLFVPLTLG+++LL IMES+YVMT KQIYKDMT+FWGKLFGIN
Sbjct: 5   EVVELSRLQFAITALYHFLFVPLTLGLSWLLVIMESVYVMTGKQIYKDMTQFWGKLFGIN 64

Query: 76  FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEALVAFFLESTFVGLFFFGWDRLS 135
           FA+GV TGLT+EFQFGTNWSYYSHYVGDIFG PLA+E L+AFFLESTFVGLFFFGW RLS
Sbjct: 65  FAMGVTTGLTLEFQFGTNWSYYSHYVGDIFGVPLAVEGLMAFFLESTFVGLFFFGWKRLS 124

Query: 136 KRQHLVVTWLVALGSNFSALWILVANGWMQNPVGSEFNFETMRMEMVSFADVVLNPVAQV 195
           K QH+ VT+LVALGSN SALWILVANGWM NPVG+ FN++TMRME+ S   V+ NPVAQV
Sbjct: 125 KVQHVFVTFLVALGSNLSALWILVANGWMNNPVGATFNYQTMRMELDSIFSVLFNPVAQV 184

Query: 196 KFVHTVAAGYTTGAMFILGISAYYLLKGRDVAFARRSFAIAASFGMASVLSVIVLGDESG 255
           KFVHTV+AGY T +MF+LG+S++YLLK RD  FA RSFAIAA FG+AS L VIVLGDESG
Sbjct: 185 KFVHTVSAGYVTASMFVLGVSSWYLLKRRDTEFALRSFAIAAGFGLASTLCVIVLGDESG 244

Query: 256 YELGEVQRVKLAAIESEWHTEPAPAAFTLFGIPNQEEMRTDYAIKIPFALGIIATRSLDE 315
           Y  GEVQ+VKLAAIESEW T PAPA FT+ GIPNQ+E RTDYAI+IP+ALG+IATRSLDE
Sbjct: 245 YRTGEVQQVKLAAIESEWETAPAPAPFTIIGIPNQKEERTDYAIRIPYALGLIATRSLDE 304

Query: 316 QVVGLRDLRDEHVERIRTGIYAYDLLERLRAGEKTPENMAAFDEVKHDLGYGLLLKRYTD 375
            VVGL+DL   +  RI+ G+ AY  L++L+ G+ T E  AAFD  K DLGYGL+LK++T 
Sbjct: 305 PVVGLKDLMAHNEVRIKNGMLAYAALQKLKQGDITDEAKAAFDAHKQDLGYGLMLKQFTA 364

Query: 376 KVTDATEEQIQAAADDSIPTVWPLFWSFRIMVACGFIMLVVFGAAFIQTCRQK---IEQK 432
            VTDAT +QI  AA  +IP V P+F+SFR+MV  G + L  F  AF   C Q+   +E++
Sbjct: 365 NVTDATPDQIAQAAKKTIPPVAPVFFSFRLMVGLGILFLATFVLAF-WFCAQRSLLLEKR 423

Query: 433 KWVLKAALFSIPLPWIAVETGWFVAEYGRQPWAVGEILPVNVAASALSAGEIITSMLAIL 492
           +W L+ A+++IPLPW+A E GW VAE GRQPW +  ILP +++AS+L+  ++  S+   +
Sbjct: 424 RWFLRWAVWAIPLPWLAAEFGWIVAEVGRQPWTIAGILPTHLSASSLTPNDLYLSIAGFV 483

Query: 493 ALYTIFLIAEVYLMVKFTRKGPSSLKTGRYHFEQ 526
             YT+  + E+ LM K+ R GPSSL TGRYH EQ
Sbjct: 484 VFYTVLFVIEITLMFKYARLGPSSLHTGRYHHEQ 517