Pairwise Alignments

Query, 541 a.a., cytochrome d terminal oxidase subunit 1 from Vibrio cholerae E7946 ATCC 55056

Subject, 518 a.a., cytochrome bd ubiquinol oxidase, subunit I (RefSeq) from Shewanella sp. ANA-3

 Score =  822 bits (2122), Expect = 0.0
 Identities = 395/511 (77%), Positives = 451/511 (88%)

Query: 16  DVVDLSRLQFALTAMYHFLFVPLTLGMAFLLAIMESLYVMTDKQIYKDMTKFWGKLFGIN 75
           +VV+LSRLQFALTAMYHFLFVPLTLG+AFLLAIMESLYVMTDKQIYKDMTKFWGKLFGIN
Sbjct: 5   EVVELSRLQFALTAMYHFLFVPLTLGLAFLLAIMESLYVMTDKQIYKDMTKFWGKLFGIN 64

Query: 76  FALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEALVAFFLESTFVGLFFFGWDRLS 135
           FALGV+TGL MEFQFGTNWSYYSHYVGDIFGAPLAIE L+AFFLESTFVG+FFFGWDR S
Sbjct: 65  FALGVSTGLAMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGMFFFGWDRFS 124

Query: 136 KRQHLVVTWLVALGSNFSALWILVANGWMQNPVGSEFNFETMRMEMVSFADVVLNPVAQV 195
           KRQHL  TWLVA GSNFSALWILVANGWMQNPVGS FN+ETMRMEM SFADV+ NPVAQV
Sbjct: 125 KRQHLATTWLVAFGSNFSALWILVANGWMQNPVGSVFNYETMRMEMTSFADVIFNPVAQV 184

Query: 196 KFVHTVAAGYTTGAMFILGISAYYLLKGRDVAFARRSFAIAASFGMASVLSVIVLGDESG 255
           KFVHTVA+GY TGAMF+L IS+YY+LK RD+ FARRSFAIAASFGMAS+LSVIVLGDESG
Sbjct: 185 KFVHTVASGYVTGAMFVLAISSYYILKKRDLPFARRSFAIAASFGMASILSVIVLGDESG 244

Query: 256 YELGEVQRVKLAAIESEWHTEPAPAAFTLFGIPNQEEMRTDYAIKIPFALGIIATRSLDE 315
           Y++GE QRVKLAAIE+EWHTEPAPAAFT  G PNQE M TD+A+KIP+A+GI+ATRSLDE
Sbjct: 245 YKVGEAQRVKLAAIEAEWHTEPAPAAFTAVGFPNQETMHTDFAVKIPYAMGIVATRSLDE 304

Query: 316 QVVGLRDLRDEHVERIRTGIYAYDLLERLRAGEKTPENMAAFDEVKHDLGYGLLLKRYTD 375
           +V GLRDL  EH  RIR G+ AY++L +LRAG+K+PE   AF+  K DLGYGLLLKRYTD
Sbjct: 305 EVTGLRDLVAEHEVRIRNGMKAYEMLVKLRAGDKSPELRDAFEAAKVDLGYGLLLKRYTD 364

Query: 376 KVTDATEEQIQAAADDSIPTVWPLFWSFRIMVACGFIMLVVFGAAFIQTCRQKIEQKKWV 435
            V DATEEQI+AAA DSIP V P+FWSFR+MV  GF+ML VF AAF Q+ R +IE+KKWV
Sbjct: 365 NVVDATEEQIKAAAKDSIPNVAPIFWSFRVMVGLGFVMLFVFAAAFWQSTRHQIEEKKWV 424

Query: 436 LKAALFSIPLPWIAVETGWFVAEYGRQPWAVGEILPVNVAASALSAGEIITSMLAILALY 495
           LKAALFS+PLPWIA+E GWFVAEYGRQPW + E+LP  ++AS+L+ G++  S+++I   Y
Sbjct: 425 LKAALFSLPLPWIAIECGWFVAEYGRQPWTISEVLPTFMSASSLTTGDLWFSIISISLFY 484

Query: 496 TIFLIAEVYLMVKFTRKGPSSLKTGRYHFEQ 526
           T+ L+ E++LM+KF R GPSSLKTGRYHFE+
Sbjct: 485 TVLLVIEIFLMLKFARLGPSSLKTGRYHFEK 515