Pairwise Alignments

Query, 378 a.a., cytochrome d ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 384 a.a., cytochrome d ubiquinol oxidase subunit II from Parabacteroides merdae CL09T00C40

 Score =  122 bits (305), Expect = 2e-32
 Identities = 103/374 (27%), Positives = 180/374 (48%), Gaps = 34/374 (9%)

Query: 4   YEILRLIWWVLIGVL--LVGFAITDGFDMGVGALVPIIGKNDNERRVMINSIAPHWDGNQ 61
           Y +L+  WW L+ +L  L+ F +   F  G  +L+  IGK + ++++++NS    W+   
Sbjct: 5   YILLQHYWWFLVSLLGALLVFLL---FVQGGQSLLFTIGKTELQQKMLLNSTGRKWEFTF 61

Query: 62  VWLITAGGALFAAWPLVYATSFSGFYLAMIVTLAALWLRPVGLDYRSKIESTKWRNNWDL 121
             L+T GGA FA++PL Y+TSF G Y   ++ LA   L+ V  +Y+SK  +   +  + +
Sbjct: 62  TTLVTFGGAFFASFPLFYSTSFGGAYWVWMLILACFVLQAVSYEYQSKKGNLLGKKTYQV 121

Query: 122 AISASGFIPPVIFGVAFGNLLQGVPF-----QLSDFLMP---TYHGSFFGLLNPFA---L 170
            +  +G + P++ G A G    G  F     QL+D  MP   T+   + GL   F    +
Sbjct: 122 FLLLNGILGPILLGTAVGTFFSGAEFVVNKGQLTDVAMPVISTWATPWHGLEAAFVFWNV 181

Query: 171 LCGLVSLFMTLLQGSAW-LQMKTTSHVHQRARNVAQLTGLLTAVCFVAAGFWVQHIDGYM 229
             GL   F+  +Q   + +     + + +R+R    +   L  V F+     +   DG+ 
Sbjct: 182 CLGLAVFFLARIQALLYFINNIDDAEIVKRSRKHLVIETALFLVFFLVFLVHLLLADGF- 240

Query: 230 IVGAIDGNAASNPLNKEVIREAGAWLHNFEQ---VPVLWLAPALGVLMPLLSVLASRLDK 286
                    A +P  KEV  +   +  N  +   VPV+ L    GVL  ++  + S   K
Sbjct: 241 ---------AVDPETKEVYMQPYKYFMNLVEMPAVPVVLLVGVAGVLYGIVRTILSDTWK 291

Query: 287 GGLAFLTSS--LGNAGVIFTAGFAMFPFVMPSSLNPAHSLTMWDATSSKLTLELMTVVAV 344
            G+ F  +   L    ++  AG+    +  PS  +   SLT+ ++ SS  TLE+M+ V+ 
Sbjct: 292 KGIWFSGAGTVLTVLALLLCAGWNNTAY-YPSVADLQSSLTIGNSCSSPFTLEVMSYVS- 349

Query: 345 VMVPIILGYTIWSY 358
           ++VP +LGY  +++
Sbjct: 350 ILVPFVLGYIFYAW 363