Pairwise Alignments

Query, 378 a.a., cytochrome d ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., cytochrome d ubiquinol oxidase subunit 2 from Phaeobacter inhibens DSM 17395

 Score =  158 bits (399), Expect = 2e-43
 Identities = 111/361 (30%), Positives = 166/361 (45%), Gaps = 38/361 (10%)

Query: 7   LRLIWWVLIGVLLVGFAITDGFDMGVGALVPIIGKNDNERRVMINSIAPHWDGNQVWLIT 66
           L  IW  +I   ++ + + DGFD+GVG L P    ++ +R  M+NSIAP WDGN+ WL+ 
Sbjct: 5   LSFIWAGIIAFAVLTYVVLDGFDLGVGILFPF-ATSERDRATMMNSIAPVWDGNETWLVL 63

Query: 67  AGGALFAAWPLVYATSFSGFYLAMIVTLAALWLRPVGLDYRSKIESTKWRNNWDLAISAS 126
            GG LFA +PL YA      Y+ + + L AL  R V  +YR +  +T+WR  WD A    
Sbjct: 64  GGGGLFAVFPLAYAVIMPALYMPITLMLLALVFRGVAFEYRWR--TTRWRGVWDSAFFGG 121

Query: 127 GFIPPVIFGVAFGNLLQGVPFQLSDFLMPTYHGSFFGLLNPFALLCGLVSLFMTLLQGSA 186
             +   + G+A G L+QGV  +        Y G ++  L PF++L GL  L    L G+ 
Sbjct: 122 SVVAATMQGIALGALVQGVEVE-----GRAYAGGWWDWLTPFSVLTGLAVLTGYALLGAT 176

Query: 187 WLQMKTTSHVHQRARNVAQLTGLLTAVCFVAAGFWVQHIDGYMIVGAIDGNAASNPLNKE 246
           WL MKT   + ++ R  A+  G  T              D                   E
Sbjct: 177 WLNMKTEGELQRQMRGYARWLGAGTLAAIALVSLLTPFQD------------------PE 218

Query: 247 VIREAGAWLHNFEQVPVLWLAPALGVLMPLLSVLASRLDKGGLAFLTSSLGNAGVIFTA- 305
             R    W  N        L P L  L         +  +    FL ++LG   + F   
Sbjct: 219 YFRR---WF-NLPGSLFSLLVPGLVALCSYALFQGLKGSRDAQPFL-AALGLFVLSFIGI 273

Query: 306 GFAMFPFVMPSSLNPAHSLTMWDATSSKLTLELMTVVAVVMVPIILGYTIWSYYKMFGRL 365
           G + +PF++P        LT+ +A +   +L    V AVV+VP+ILGYT ++Y+   G++
Sbjct: 274 GISFYPFIVPP------GLTIAEAAAPDESLMFTLVGAVVLVPLILGYTAYAYWVFRGKI 327

Query: 366 D 366
           +
Sbjct: 328 N 328