Pairwise Alignments

Query, 378 a.a., cytochrome d ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 333 a.a., cytochrome d ubiquinol oxidase, subunit II from Marinobacter adhaerens HP15

 Score =  157 bits (397), Expect = 4e-43
 Identities = 105/363 (28%), Positives = 171/363 (47%), Gaps = 46/363 (12%)

Query: 7   LRLIWWVLIGVLLVGFAITDGFDMGVGALVPIIGKNDNERRVMINSIAPHWDGNQVWLIT 66
           L LIW  +IG  ++ + + DGFD+GVG L P    N+  R  M+NS+AP WDGN+ WL+ 
Sbjct: 6   LPLIWAFIIGFGIIMYVLMDGFDLGVGILFPF-APNEEARDTMMNSVAPVWDGNETWLVL 64

Query: 67  AGGALFAAWPLVYATSFSGFYLAMIVTLAALWLRPVGLDYRSKIESTKWRNNWDLAISAS 126
            G  L AA+P+VY+      Y+ + + LA L  R V  ++R K  ++++  NW  A +  
Sbjct: 65  GGAGLLAAFPMVYSIFLPALYIGVFLLLAGLIFRGVAFEFRFKARTSRYLWNW--AFAGG 122

Query: 127 GFIPPVIFGVAFGNLLQGVPFQLSDFLMPTYHGSFFGLLNPFALLCGLVSLFMTLLQGSA 186
             +     G   G  +QG  F+ ++     Y G     L PF +L GL  L    L GS 
Sbjct: 123 STVASFAQGAVVGAYIQG--FETAN---GVYVGGALDWLTPFTVLTGLGMLAGYSLLGST 177

Query: 187 WLQMKTTSHVHQRARNVAQLTGLLTAVCFVAAGFWVQHIDGYMIVGAIDGNAASNPLNKE 246
           WL MKT  ++ Q A  +     L   V F   G W   +D                   E
Sbjct: 178 WLIMKTEGYLQQWAYKITLPLLLAVLVVFGIIGVWTPFVD-------------------E 218

Query: 247 VIREAGAWLHNFEQVPVLWLAPALGVLMPLLSVLASRLDKGGLAFLTSSLGNAGVIFTAG 306
           ++RE   W   F  + ++W+ P L +L  +    + R  + G+ F+ +     G+  T  
Sbjct: 219 MVRE--RW---FSNLSIIWVLPVLTLLCAIQIYRSVRDRRDGMPFVAT----MGLFITTY 269

Query: 307 FAM----FPFVMPSSLNPAHSLTMWDATSSKLTLELMTVVAVVMVPIILGYTIWSYYKMF 362
             +    +P+V+P         T+W+A S+  +   + +  + ++PI+L YT W+Y+   
Sbjct: 270 LGLVVSRWPYVVPP------EYTLWEAASAYESQLFLLLGLLFVIPIVLVYTAWTYWVFR 323

Query: 363 GRL 365
           G++
Sbjct: 324 GKV 326