Pairwise Alignments

Query, 378 a.a., cytochrome d ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., cytochrome d ubiquinol oxidase subunit II from Pantoea sp. MT58

 Score =  153 bits (386), Expect = 8e-42
 Identities = 114/370 (30%), Positives = 175/370 (47%), Gaps = 48/370 (12%)

Query: 1   MFDYEILRLIWWVLIGVLLVGFAITDGFDMGVGALVPIIGKNDNERRVMINSIAPHWDGN 60
           M DY +   IW+V+I    + + + DGFD+G+G L P   K+  ER +M+N++AP WDGN
Sbjct: 1   MIDYSV---IWFVIIVFATLMYIVMDGFDLGIGLLFPF-NKDAGERDMMVNTVAPVWDGN 56

Query: 61  QVWLITAGGALFAAWPLVYATSFSGFYLAMIVTLAALWLRPVGLDYRSKIESTKWRNNWD 120
           + WL+  G  LF A+PL YA       + +   L  L  R V  ++R K      R  WD
Sbjct: 57  ETWLVLGGAGLFGAFPLAYAVITDALSIPLTAMLIGLIFRGVAFEFRFKAVEGH-RAFWD 115

Query: 121 LAISASGFIPPVIFGVAFGNLLQGVPFQLSDFLMPTYHGSFFGLLNPFALLCGLVSLFMT 180
            +  A   +     GVA G  L G+P +   F      GS    L PF L CG+  +   
Sbjct: 116 KSFIAGSVLATFSQGVAVGAFLDGIPVEGRRFA-----GSALDWLAPFPLFCGVGLVVAY 170

Query: 181 LLQGSAWLQMKTTSHVHQRARNVAQLTGLLTAVCFVAAGFWVQHIDGYMIVGAIDGNAAS 240
            L G  WL MKT + +H++   +A  T L+ A+               +I+G +   +  
Sbjct: 171 ALLGCTWLIMKTENELHRKMSALA--TPLVIAL--------------LVIIGIV---SLW 211

Query: 241 NPLNKEVIREAGAW-----LHNFEQVPVLWLAPALGVLMPLLSVLASRLDKGGLAFLTSS 295
            P   + I  A  W     L  F  VPVL L  + G++  +     +      L      
Sbjct: 212 TPFTHQDI--AHRWFSKPNLFLFLPVPVLVLLCSWGIVRAIKR--EAHYSPFLLTLALVF 267

Query: 296 LGNAGVIFTAGFAMFPFVMPSSLNPAHSLTMWDATSSKLTLELMTVVAVVMVPIILGYTI 355
           LG +G+    G +++P ++P       S+T+WDA S   +   M V +++++P+ILGYT 
Sbjct: 268 LGFSGL----GISVWPNIIPP------SVTIWDAASPPQSQAFMLVGSLLIIPMILGYTF 317

Query: 356 WSYYKMFGRL 365
           WSYY   G++
Sbjct: 318 WSYYVFRGKI 327