Pairwise Alignments

Query, 378 a.a., cytochrome d ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., ubiquinol oxidase subunit II, cyanide insensitive from Burkholderia phytofirmans PsJN

 Score =  150 bits (379), Expect = 5e-41
 Identities = 108/366 (29%), Positives = 183/366 (50%), Gaps = 50/366 (13%)

Query: 7   LRLIWWVLIGVLLVGFAITDGFDMGVGALVPIIGKNDNERRVMINSIAPHWDGNQVWLIT 66
           L ++W  +IG+ +  + + DGFD+G+G L P   +   +R+VM+N+IAP WDGN+ +L+ 
Sbjct: 5   LPVVWAAIIGLGVFIYVMLDGFDLGIGLLFPFF-EEKGDRQVMLNTIAPVWDGNETFLVL 63

Query: 67  AGGALFAAWPLVYATSFSGFYLAMIVTLAALWLRPVGLDYRSKIESTKWRNNWDLAISAS 126
            G  L+ A+P+VY+T     YL +I+ +  L  R    + R+K  +T+ ++ WDLA  A 
Sbjct: 64  GGAGLYGAFPVVYSTLLPANYLPLILMVVGLIFRGAAFELRAK--ATRTQHAWDLAFIAG 121

Query: 127 GFIPPVIFGVAFGNLLQGVPFQLSDFLMPTYHGSFFGLLNPFALLCGLVSLFMTLLQGSA 186
             +  +  G+  G+LLQG+       +   + G  F  L+PF+L CG+  LF     G  
Sbjct: 122 SALAGLCQGIVLGSLLQGI-----KIVDDRFAGGPFDWLSPFSLFCGIGVLFTYATLGCG 176

Query: 187 WLQMKTTSHVHQRARNVAQ-LTGLLTAVCFVAAGFWVQHIDGYMIVG--AIDGNAASNPL 243
           WL +KT   + ++ R V + L  +L  + FV +  W        ++G  A++     +  
Sbjct: 177 WLILKTEGELQRKMREVMRPLLAVLLGIIFVVS-LWT-------VIGLPAVEHRWFGS-- 226

Query: 244 NKEVIREAGAWLHNFEQVPVLWLAPALGVLMPLLSVLASRLDKGGLAFLTS----SLGNA 299
                     +L  F  VP+L LA   G+   L      RL    + FL +     LG +
Sbjct: 227 ---------GYLGWFMPVPILVLACVWGIFRSL------RLQHEAMPFLLTLALCFLGYS 271

Query: 300 GVIFTAGFAMFPFVMPSSLNPAHSLTMWDATSSKLTLELMTVVAVVMVPIILGYTIWSYY 359
           G++     +++P ++P       SLT+W+A+SS  +     V  V+++PIIL Y    Y 
Sbjct: 272 GLL----ISIWPNIVPP------SLTIWEASSSHSSQLFTLVGTVIVLPIILVYNAMQYR 321

Query: 360 KMFGRL 365
              G++
Sbjct: 322 VFRGKV 327