Pairwise Alignments

Query, 227 a.a., protein TolQ from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., MotA/TolQ/ExbB proton channel (NCBI) from Rhodospirillum rubrum S1H

 Score =  138 bits (348), Expect = 1e-37
 Identities = 88/195 (45%), Positives = 115/195 (58%), Gaps = 12/195 (6%)

Query: 4   DISFLDLFLQASFLVKMVMLTLLGMSVASWAAIIKRSKVISAAEREADTFEDRFWSGMDL 63
           D S L LFLQA  +VK VM  L+  S+A WA I+ ++  +  A REA  FE R  +  DL
Sbjct: 79  DFSALGLFLQADPVVKGVMGLLVVASIAVWAVILDKAVRLVIARREARAFE-RAVAANDL 137

Query: 64  GALYQDVKKRKDDIYGIEEIFYAGFTEFARLRKTNPGAPDFVM-EGTGRAMRVAVAREVD 122
            A+          +    E +          +   PG    V  +G  RAMR+ V  E+ 
Sbjct: 138 SAVMLKGGMATTVVRSAHEAW----------QDYQPGEARSVRRDGIERAMRLTVNAELR 187

Query: 123 SLETSLPFLATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALIATAIG 182
            LE  LP LA+VGS +P++GLFGTVWGIMH+F ++ +    +LA+VAPGIAEAL ATAIG
Sbjct: 188 KLEVGLPLLASVGSAAPFVGLFGTVWGIMHSFTSIAQSNDTSLAVVAPGIAEALFATAIG 247

Query: 183 LFAAIPAVMAYNRLS 197
           L AAIPAV+A+N LS
Sbjct: 248 LVAAIPAVLAFNALS 262