Pairwise Alignments

Query, 356 a.a., protein TolA from Vibrio cholerae E7946 ATCC 55056

Subject, 561 a.a., signal recognition particle-docking protein FtsY (RefSeq) from Shewanella loihica PV-4

 Score = 95.5 bits (236), Expect = 3e-24
 Identities = 79/248 (31%), Positives = 136/248 (54%), Gaps = 24/248 (9%)

Query: 2   KENKSRKSNDAKSITISLAMHGALVAILLWGADFTMSDPEPTGQMIEAVVIDPQLVRQQA 61
           +++KS++   A  + +S        ++    A       E      E   I+ +  R +A
Sbjct: 11  RKDKSKQEAAAPEVEVSTQADAEQASVEEDNARLAAEQAEQECLAEEQARIEAENARLEA 70

Query: 62  QQIRSQREEAAKKEQERLDKLRRESEQLEKNRQAEEERIRQLK--EQQAKEAKAAREAEK 119
           +   S+R  A + EQ+R+      +EQ E+ R AEE+   +++   Q A++A+   E+E+
Sbjct: 71  E---SERLAAEQAEQQRI-----AAEQAEQQRLAEEQARIEVENARQAAEQARLEAESER 122

Query: 120 L-REQKEQERLAAEQKARE---EKERAAKAEAERKVKEEAAKKAEQERVAKEAAAAKA-- 173
           L  EQ EQERLAAEQ  ++   E++   + E  R+  E+A  +AE ER+A E A  +   
Sbjct: 123 LAAEQAEQERLAAEQAEQQRIAEEQARVETENARQAAEQARLEAESERLAAEQAEQQRLA 182

Query: 174 -EQQRIEREKEAKLAEEKAKREKEVAAKAEQERLAKEKA------AKEAADKAKKEKERA 226
            EQ R+E E  A+LA EKA++E+  A +AEQ+R+A+E+A      A+ AA++A +E++  
Sbjct: 183 DEQARVEAE-NARLAAEKAEQERLAAEQAEQQRIAEEQARVEEENARLAAEQAGQEEQVE 241

Query: 227 AKAEAERK 234
            + E ++K
Sbjct: 242 QQPEPQQK 249



 Score = 90.5 bits (223), Expect = 1e-22
 Identities = 75/193 (38%), Positives = 112/193 (58%), Gaps = 23/193 (11%)

Query: 55  QLVRQQAQQIRSQREEAAKKEQERLDKLRRESEQLEKNRQAEEERI--RQLKEQQAKEAK 112
           +L  +QA+Q     EE A+ E E   +L  ESE+L    QAE++RI   Q ++Q+  E +
Sbjct: 43  RLAAEQAEQ-ECLAEEQARIEAENA-RLEAESERLAAE-QAEQQRIAAEQAEQQRLAEEQ 99

Query: 113 AAREAEKLREQKEQERLAAEQKAREEKERAAKAEAERKVKEEAAKKAEQERVAKEAAAAK 172
           A  E E  R+  EQ RL AE     E+  A +AE ER     AA++AEQ+R+A+E A  +
Sbjct: 100 ARIEVENARQAAEQARLEAES----ERLAAEQAEQERL----AAEQAEQQRIAEEQARVE 151

Query: 173 AEQQRIEREKEAKLAEEKAKREKEVAAKAEQERLAKEKA------AKEAADKAKKEKERA 226
            E  R    + A+ A  +A+ E+  A +AEQ+RLA E+A      A+ AA+KA++E+  A
Sbjct: 152 TENAR----QAAEQARLEAESERLAAEQAEQQRLADEQARVEAENARLAAEKAEQERLAA 207

Query: 227 AKAEAERKAQEAA 239
            +AE +R A+E A
Sbjct: 208 EQAEQQRIAEEQA 220



 Score = 75.9 bits (185), Expect = 2e-18
 Identities = 64/183 (34%), Positives = 98/183 (53%), Gaps = 13/183 (7%)

Query: 55  QLVRQQAQQIRSQREEAAKKEQERLDKLRRESEQLEKNR----QAEEERIRQLKEQQAKE 110
           +L  +QA+       +AA++ +   +  R  +EQ E+ R    QAE++RI +  EQ   E
Sbjct: 94  RLAEEQARIEVENARQAAEQARLEAESERLAAEQAEQERLAAEQAEQQRIAE--EQARVE 151

Query: 111 AKAARE-AEKLREQKEQERLAAEQKAREEKERAAKAEAERKVKEEAAKKAEQERVAKEAA 169
            + AR+ AE+ R + E ERLAAEQ A +++    +A  E +    AA+KAEQER+A E  
Sbjct: 152 TENARQAAEQARLEAESERLAAEQ-AEQQRLADEQARVEAENARLAAEKAEQERLAAE-- 208

Query: 170 AAKAEQQRIEREKEAKLAEEKAKREKEVAAKAEQERLAKEKAAKEAADKAKKEKERAAKA 229
             +AEQQRI  E++A++ EE A+   E A + EQ     E   K   +      +R  K 
Sbjct: 209 --QAEQQRI-AEEQARVEEENARLAAEQAGQEEQVEQQPEPQQKPTKEGFFARLKRGLKR 265

Query: 230 EAE 232
            +E
Sbjct: 266 TSE 268