Pairwise Alignments

Query, 356 a.a., protein TolA from Vibrio cholerae E7946 ATCC 55056

Subject, 345 a.a., tolA protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  188 bits (477), Expect = 2e-52
 Identities = 128/361 (35%), Positives = 207/361 (57%), Gaps = 37/361 (10%)

Query: 9   SNDAKSITISLAMHGALVAILLWGADFTMSDPEPTGQM----IEAVVIDPQLVRQQAQQI 64
           SN A  ++IS  +H  ++ IL  G DFT   PEP  Q+    ++AV++D Q V  Q +++
Sbjct: 5   SNVALPLSISAGIHIGVIIILAIGIDFTHK-PEPVQQVSAPAVKAVMVDQQQVANQVEKL 63

Query: 65  RSQREEAAKKEQERLDKLRRESEQLEKNRQAEEERIRQLKE---QQAKEAKAAREAEKLR 121
           + ++ +  ++E+ER  +L R++++ ++ R+ E+ +++QL E   QQ  E + A EA K  
Sbjct: 64  KQEKRDTERRERERQAELERKAQEAKQAREREQAQLKQLAEERKQQEIETQKANEAAK-- 121

Query: 122 EQKEQERLAAEQKAREEKERAAKAEAERKVKEE-------AAKKAEQERVAKEAAAAKAE 174
                   AA+ K ++EKE+A KAEA+RK+KE+       AA+KA ++R  +EAA AKAE
Sbjct: 122 --------AAQLKQQQEKEKAQKAEADRKLKEQERKLAEDAAQKAAEKRKVEEAAVAKAE 173

Query: 175 QQRIEREKEAKLAEEKAKREKEVAAKAEQERLAKEKAAKEAADKAKKEKERAAKAEAERK 234
             R ++E EAK     AK E +  AKA++   AK  A  +A  +AK + +  AKA+AE K
Sbjct: 174 ADRKQKEAEAK-----AKAEADAKAKADK---AKADAEAKAKAEAKAKADAKAKADAEAK 225

Query: 235 AQEAALNDIFGSLSEESQQNNAARQQFVTSEVGRYGAIYTQLIRQNLLVEDSFRGKQCRV 294
           A      ++  +L+ E    +    + + +EVG+Y A+    I++NL+V++S RGK C V
Sbjct: 226 ALAQQEQEMADALAAEQAALSQTMNKQMQTEVGKYTAMIKSTIQRNLVVDESMRGKTCTV 285

Query: 295 NLKLIPTGTGALLGSLTVLDGDSRLCAATKRAVAQVNSFPLPKDQPDVVEKLKNINLTVA 354
           +++L     G ++ S T   GD  +C ATK A+ +    P+  D P V   +K INL V 
Sbjct: 286 SVRL--ANDGFVISSQT-QGGDPNVCRATKAAILKAGKLPVSPD-PAVYNLMKEINLIVE 341

Query: 355 P 355
           P
Sbjct: 342 P 342