Pairwise Alignments

Query, 450 a.a., protein TolB from Vibrio cholerae E7946 ATCC 55056

Subject, 433 a.a., tol-pal system beta propeller repeat protein TolB from Pseudomonas stutzeri RCH2

 Score =  334 bits (857), Expect = 3e-96
 Identities = 178/450 (39%), Positives = 272/450 (60%), Gaps = 30/450 (6%)

Query: 5   LVFVLMLIGTGFSNIANAALELVITDGIDSARPIAIVPFKWEGATKLPEDVSAVIASDLQ 64
           LV +  L G   +   N    +V+T G D A PIA+VPF W+G T LPED++ ++ +DL+
Sbjct: 9   LVLLCCLAGIAVAQEKN----IVVTSGADRAIPIAVVPFGWQGGTVLPEDMAEIVGNDLR 64

Query: 65  RSGKFSPVPTSKMPQTPYSEEQVNFGKWTSMGVDSLLTGTITQNAEGSYVISYQLVDIVR 124
            SG F P+P   M   P    ++ +  W ++G   ++ G+I + A G   + Y++ ++  
Sbjct: 65  NSGIFQPIPRQNMISMPTRGSEIIYRDWKALGAQYVMVGSI-EPAGGRLQVRYEVFNVTT 123

Query: 125 GQLTQGQSKALSQDGQLVLSKDHVLFNKVATVPASRMREYAHRIADLVYEELTGERGAFL 184
            Q                     V+   V   P  ++R+ AH  AD  +E+LTG +GAF 
Sbjct: 124 EQ--------------------QVMTGTVGGSP-DQLRDMAHHAADQSFEKLTGIKGAFS 162

Query: 185 TRIAYVVVNDKDPYP--YQLRIADYDGYNERLVLRSKQPLMSPAWSPDGQTLAYVSFQNG 242
           TR+ YV V         Y L+ +DYDG     +L+S++P++SP +SPDG+ +AYVSF+  
Sbjct: 163 TRLLYVTVERLGGANTRYTLQRSDYDGARAVTLLQSREPILSPRYSPDGRRIAYVSFEQK 222

Query: 243 QAEIYMMNIYSGKREKLTSFPRHNGAPRFSPDGKTLALVLSKTGNLQVYTMDLATRRLTE 302
           +  I++ +I +G+RE++T+F   NGAP FSPDG  LA VLSK GN ++Y MDL +R+L  
Sbjct: 223 RPRIFVQHIDTGRREQITNFEGLNGAPAFSPDGNRLAFVLSKDGNPEIYVMDLGSRQLQR 282

Query: 303 VTSGRSNNTEPFWHPDGKSLIFTSDRGGKPQIYQVNLSGGETKRLTWQGSQNLGGQITPD 362
           +T+  + +TEPFW  DG+++ FTSDR GKPQ+Y+  L     +R+T+ G+ N   +++ D
Sbjct: 283 LTNHYAIDTEPFWGADGQTIYFTSDRAGKPQVYKQRLGSNSAERVTFVGNYNANPKLSAD 342

Query: 363 GKFLVMVNRSD--SGFNLAKQDLETGAMQILTKTLLDESPSIAPNGGMVIYSSIYNKANV 420
            K LVM++R D  + F +A QDL+ G ++IL+ T LDESP++APNG M+IY++      V
Sbjct: 343 EKTLVMIHRQDGYTNFKVAAQDLQRGNLRILSDTSLDESPTVAPNGTMLIYATRQQGRGV 402

Query: 421 LSMVSIDGRFKARLPATNGRVRAPAWSPFL 450
           L +VSI+GR +  LP   G VR P+WSP+L
Sbjct: 403 LMLVSINGRVRLPLPTAQGEVREPSWSPYL 432