Pairwise Alignments

Query, 450 a.a., protein TolB from Vibrio cholerae E7946 ATCC 55056

Subject, 433 a.a., TolB, N-terminal:TolB, N-terminal from Pseudomonas syringae pv. syringae B728a

 Score =  341 bits (875), Expect = 2e-98
 Identities = 184/454 (40%), Positives = 283/454 (62%), Gaps = 29/454 (6%)

Query: 1   MFKRLVFVLMLIGTGFSNIANAALELVITDGIDSARPIAIVPFKWEGATKLPEDVSAVIA 60
           +F+ L+ VL       + ++     +++T G D A PIA+VPF W+G + LPED++ +I+
Sbjct: 4   LFRGLLVVLCFAS---AMVSAEEKNILVTSGSDRAAPIAVVPFGWQGGSVLPEDMAEIIS 60

Query: 61  SDLQRSGKFSPVPTSKMPQTPYSEEQVNFGKWTSMGVDSLLTGTITQNAEGSYVISYQLV 120
           +DL+ SG ++P+P   M   P    +V F  W ++G   ++ G IT  A G   I Y L 
Sbjct: 61  NDLRNSGYYAPIPKQNMISLPTQASEVIFRDWKALGAQYVMVGNITP-AGGRLQIQYALF 119

Query: 121 DIVRGQLTQGQSKALSQDGQLVLSKDHVLFNKVATVPASRMREYAHRIADLVYEELTGER 180
           ++   Q                     VL   V+     ++R+ AH IAD  +E+LTG +
Sbjct: 120 NVATEQ--------------------QVLTGNVSGTN-DQLRDMAHYIADQSFEKLTGIK 158

Query: 181 GAFLTRIAYVVVN--DKDPYPYQLRIADYDGYNERLVLRSKQPLMSPAWSPDGQTLAYVS 238
           GAF TR+ YV      ++   Y L+ +DYDG     +L+S++P++SP ++PDG+ +AYVS
Sbjct: 159 GAFSTRMLYVTAERFSENNTRYTLQRSDYDGARAVTLLQSREPILSPRFAPDGKRIAYVS 218

Query: 239 FQNGQAEIYMMNIYSGKREKLTSFPRHNGAPRFSPDGKTLALVLSKTGNLQVYTMDLATR 298
           F+  +  I++ +I +G+RE++T+F   NGAP +SPDG  LA VLSK GN ++Y ++LA+R
Sbjct: 219 FEQKRPRIFVQHIDTGRREQITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVINLASR 278

Query: 299 RLTEVTSGRSNNTEPFWHPDGKSLIFTSDRGGKPQIYQVNLSGGETKRLTWQGSQNLGGQ 358
           +L+ VT+  S +TEPF+  DG +L FTSDRGGKPQIY+ N++GG  +R+T+ G+ N   +
Sbjct: 279 QLSRVTNDSSIDTEPFFGKDGSTLYFTSDRGGKPQIYKTNINGGGAERVTFVGNYNANPK 338

Query: 359 ITPDGKFLVMVNRSD--SGFNLAKQDLETGAMQILTKTLLDESPSIAPNGGMVIYSSIYN 416
           ++ D K LVM++R D  + F +A QDL  G+++ILT + LDESP++APNG MVIY++   
Sbjct: 339 LSADEKTLVMIHRQDGFTNFKVAVQDLARGSVKILTDSNLDESPTVAPNGTMVIYATRQQ 398

Query: 417 KANVLSMVSIDGRFKARLPATNGRVRAPAWSPFL 450
              VL +VSI+GR +  LP   G VR P+WSP+L
Sbjct: 399 GRGVLMLVSINGRVRLPLPTAQGEVREPSWSPYL 432