Pairwise Alignments

Query, 450 a.a., protein TolB from Vibrio cholerae E7946 ATCC 55056

Subject, 197 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

 Score = 54.7 bits (130), Expect = 3e-12
 Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 4/120 (3%)

Query: 216 LRSKQPLMSPAWSPDGQTLAYVSFQNGQAEIYMMNIYSGKREKLTSFPRHNG---APRFS 272
           L S+     PA S DG+ LAYV+ ++G   IY+ ++   + + L  F   +    +P  S
Sbjct: 46  LNSRYSESQPALSGDGRYLAYVAERDGHRTIYLYDLQRRQLQPLPGFADRDAIAESPSLS 105

Query: 273 PDGKTLALVLSKTGNLQVYTMDLATRRLTEVTSG-RSNNTEPFWHPDGKSLIFTSDRGGK 331
             G+ +A V S  G  ++   D AT+R   +T G R    +P   PDG+ + F S R G+
Sbjct: 106 WTGRYIAYVGSDRGRPEIQVYDRATQRREVLTQGWRGWVRQPSISPDGRLVAFESSRRGQ 165



 Score = 37.7 bits (86), Expect = 3e-07
 Identities = 37/133 (27%), Positives = 54/133 (40%), Gaps = 15/133 (11%)

Query: 200 YQLRIADYDG----YNERLVLRSKQPLM----------SPAWSPDGQTLAYVSFQNGQAE 245
           Y   +A+ DG    Y   L  R  QPL           SP+ S  G+ +AYV    G+ E
Sbjct: 63  YLAYVAERDGHRTIYLYDLQRRQLQPLPGFADRDAIAESPSLSWTGRYIAYVGSDRGRPE 122

Query: 246 IYMMNIYSGKREKLTSFPRH-NGAPRFSPDGKTLALVLSKTGNLQVYTMDLATRRLTEVT 304
           I + +  + +RE LT   R     P  SPDG+ +A   S+ G   +   D       +  
Sbjct: 123 IQVYDRATQRREVLTQGWRGWVRQPSISPDGRLVAFESSRRGQWDIELFDRGELTELDRP 182

Query: 305 SGRSNNTEPFWHP 317
            G   ++ P   P
Sbjct: 183 EGSRESSAPIASP 195