Pairwise Alignments

Query, 450 a.a., protein TolB from Vibrio cholerae E7946 ATCC 55056

Subject, 441 a.a., tolB protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  463 bits (1191), Expect = e-135
 Identities = 231/443 (52%), Positives = 313/443 (70%), Gaps = 12/443 (2%)

Query: 10  MLIGTGFSNIANAALELVITDGIDSARPIAIVPFKWEGATKLPEDVSAVIASDLQRSGKF 69
           +LI    S    AAL++VIT+G+D+ARPIA+VPF W+G   +P  +S V+ASDL RSG F
Sbjct: 9   LLIIAALSLPVKAALDIVITEGVDAARPIAVVPFVWQGTGPVPSQISDVVASDLTRSGTF 68

Query: 70  SPVPTSKMPQTPYSE-EQVNFGKWTSMGVDSLLTGTITQNAEGSYVISYQLVDIVRGQLT 128
            P+    +PQ+  S   +    KWT +  ++ + G I       Y++++ L+D+++ QL 
Sbjct: 69  KPLDALGLPQSGISTLAEFAPQKWTGINAEAAVVGAIKPYGPDQYLVTFDLIDLLKAQLA 128

Query: 129 QGQSKALSQDGQLVLSKDHVLFNKVATV-PASRMREYAHRIADLVYEELTGERGAFLTRI 187
                     GQ  L+K  +L +   TV  A++ R+Y HRI+D+VYE+LTG RGAFLTRI
Sbjct: 129 ----------GQAPLNKQDLLLDSRQTVITAAQFRQYGHRISDVVYEKLTGIRGAFLTRI 178

Query: 188 AYVVVNDKDPYPYQLRIADYDGYNERLVLRSKQPLMSPAWSPDGQTLAYVSFQNGQAEIY 247
           AYVVVN  +  PY+L IADYDGYNE ++LRS +PLMSPAWSPDG+ LAYVSF+N +AEI+
Sbjct: 179 AYVVVNHAEKAPYRLMIADYDGYNEHMLLRSPEPLMSPAWSPDGRRLAYVSFENRKAEIF 238

Query: 248 MMNIYSGKREKLTSFPRHNGAPRFSPDGKTLALVLSKTGNLQVYTMDLATRRLTEVTSGR 307
           + +I++  R K++SFP  NGAP FSPDGKTLA+ LSK G  ++YT+D+AT+    +T+  
Sbjct: 239 VQDIFTQARTKVSSFPGINGAPSFSPDGKTLAVTLSKDGQSEIYTIDIATKTTRRITNHY 298

Query: 308 SNNTEPFWHPDGKSLIFTSDRGGKPQIYQVNLSGGETKRLTWQGSQNLGGQITPDGKFLV 367
           + +TEP W PDGKSL+ TS+RGG+PQ+Y+V L  G+  RLT+ G  NLGG ITPDG+ L+
Sbjct: 299 AIDTEPSWFPDGKSLLITSERGGRPQLYKVELDSGKLTRLTFDGEWNLGGSITPDGRTLI 358

Query: 368 MVNRSDSGFNLAKQDLETGAMQILTKTLLDESPSIAPNGGMVIYSSIYNKANVLSMVSID 427
            VNR++  FN+A+ DLET  MQ+LT T LDESPS+APNG MVIY + +    VL+ VS D
Sbjct: 359 FVNRTNGKFNIARMDLETRFMQVLTTTRLDESPSVAPNGTMVIYGTTHQGRQVLAAVSTD 418

Query: 428 GRFKARLPATNGRVRAPAWSPFL 450
           GRFKARLPA  G V++P+WSPFL
Sbjct: 419 GRFKARLPAGQGEVKSPSWSPFL 441