Pairwise Alignments

Query, 450 a.a., protein TolB from Vibrio cholerae E7946 ATCC 55056

Subject, 442 a.a., TolB domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  446 bits (1146), Expect = e-130
 Identities = 214/432 (49%), Positives = 311/432 (71%), Gaps = 9/432 (2%)

Query: 20  ANAALELVITDGIDSARPIAIVPFKWEGATKLPEDVSAVIASDLQRSGKFSPVPTSKMPQ 79
           A AAL++VIT+G+D+ARPIA++PF+W+GA   P+ ++ V+ SDL RSG F P+    +PQ
Sbjct: 19  AKAALDIVITEGVDAARPIAVMPFQWQGAGAPPQAIADVVMSDLIRSGTFKPLDELGLPQ 78

Query: 80  TPYSE-EQVNFGKWTSMGVDSLLTGTITQNAEGSYVISYQLVDIVRGQLTQGQSKALSQD 138
                  Q +   W ++G ++++ G++       +++S+ L+D+V+ Q     ++AL   
Sbjct: 79  RGIGALAQFDASAWANVGAEAVVVGSVKPYGTDQFLVSFDLIDLVKAQ-----NQALKGP 133

Query: 139 GQLVLSKDHVLFNKVATVPASRMREYAHRIADLVYEELTGERGAFLTRIAYVVVNDKDPY 198
                + + ++ ++   + A++ R+Y HRI+D+VYE+LTG RGAFLTRI+YVVVN     
Sbjct: 134 TS---ATEFLMDSRQTVISAAQFRQYGHRISDIVYEKLTGIRGAFLTRISYVVVNHTQKA 190

Query: 199 PYQLRIADYDGYNERLVLRSKQPLMSPAWSPDGQTLAYVSFQNGQAEIYMMNIYSGKREK 258
            Y L IADYDGYNE+++LRS +PLMSP+WSPDG+ LAYVSF+N +AEI++ ++Y+  R K
Sbjct: 191 AYSLMIADYDGYNEQMLLRSPEPLMSPSWSPDGRRLAYVSFENKKAEIFVQDLYTQVRTK 250

Query: 259 LTSFPRHNGAPRFSPDGKTLALVLSKTGNLQVYTMDLATRRLTEVTSGRSNNTEPFWHPD 318
           ++SFP  NGAP FSPDGK+LA+ LSK G  ++Y +D+AT+    +T+  S +TEP W+PD
Sbjct: 251 VSSFPGINGAPTFSPDGKSLAVTLSKDGQPEIYVIDIATKAAKRITNHYSIDTEPSWYPD 310

Query: 319 GKSLIFTSDRGGKPQIYQVNLSGGETKRLTWQGSQNLGGQITPDGKFLVMVNRSDSGFNL 378
           GKSL+FTS+RGG+PQ+Y+V+L+ G+  R T++G  NLGG ITPDG+ ++ VNR++  FN+
Sbjct: 311 GKSLLFTSERGGRPQLYRVDLNSGKVTRETFEGEWNLGGSITPDGRSMIFVNRTNGKFNI 370

Query: 379 AKQDLETGAMQILTKTLLDESPSIAPNGGMVIYSSIYNKANVLSMVSIDGRFKARLPATN 438
           A+ DL T  MQ+LT T LDESPS+APNG MVIY + Y    VL+ VS DGRFKARLP   
Sbjct: 371 ARMDLSTRFMQVLTSTRLDESPSVAPNGTMVIYGTTYQGKQVLAAVSTDGRFKARLPVGQ 430

Query: 439 GRVRAPAWSPFL 450
           G V++P+WSPFL
Sbjct: 431 GEVKSPSWSPFL 442