Pairwise Alignments

Query, 172 a.a., peptidoglycan-associated lipoprotein from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., Major porin and structural outer membrane porin OprF from Pseudomonas fluorescens FW300-N2E2

 Score = 68.2 bits (165), Expect = 1e-16
 Identities = 51/160 (31%), Positives = 75/160 (46%), Gaps = 14/160 (8%)

Query: 13  ALPVLA-VTACSSSDDAA---NSGSQTNQSAVSTVDSNGLNAQGQLTEQELKEQALRENQ 68
           A PV A    CS SD+     N     +  A  TVD++G  A  ++   EL         
Sbjct: 184 AAPVPAPAEVCSDSDNDGVCDNVDKCPDTPANVTVDADGCPAVAEVVRVELD-------- 235

Query: 69  TIYFAFDNATIASDYEAMLAAHAAYLVKNPSLRVTIEGHADERGTPEYNIALGERRAQAV 128
            + F FD + +  +    +   A ++ + PS   T+EGH D  G   YN  L ERRA+AV
Sbjct: 236 -VKFDFDKSVVKPNSYGDIKNLADFMKQYPSTSTTVEGHTDSVGPDAYNQKLSERRAKAV 294

Query: 129 AKYL-EALGVQAGQLSIVSYGEEKPLVLGQSEEAYAKNRR 167
            + L    GV++ ++  V YGE +P+    +E   A NRR
Sbjct: 295 QQVLTNQYGVESSRVQAVGYGESRPVADNATEAGRAVNRR 334