Pairwise Alignments

Query, 172 a.a., peptidoglycan-associated lipoprotein from Vibrio cholerae E7946 ATCC 55056

Subject, 180 a.a., OmpA domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score =  179 bits (455), Expect = 2e-50
 Identities = 90/184 (48%), Positives = 133/184 (72%), Gaps = 16/184 (8%)

Query: 1   MQLNKVLKSLLIALPVLAVTACSSSDDAANSGSQTNQSAVSTVDSNGLNAQGQLT----- 55
           M LNK+ K++++ALP++A++ACSS+ ++    +    S++S  +S+ +NA G +      
Sbjct: 1   MDLNKLFKAMVVALPIMAISACSSTSESQTDAT----SSMSGSESSEMNAGGGVETGGVA 56

Query: 56  -------EQELKEQALRENQTIYFAFDNATIASDYEAMLAAHAAYLVKNPSLRVTIEGHA 108
                  +Q +K Q LR+   IYF FD ++++SD+  +L AH  YL+++P++RV IEGHA
Sbjct: 57  PILTPEEQQRIKYQELRKEHIIYFDFDRSSVSSDFSEVLNAHGEYLLEHPNVRVMIEGHA 116

Query: 109 DERGTPEYNIALGERRAQAVAKYLEALGVQAGQLSIVSYGEEKPLVLGQSEEAYAKNRRA 168
           DERGTPEYNIALGERRA+AVAKYL+++GV   Q+SIVSYGEEKP    ++++ +AKNRRA
Sbjct: 117 DERGTPEYNIALGERRAKAVAKYLQSMGVLPSQMSIVSYGEEKPQDFSRTDDGFAKNRRA 176

Query: 169 VLVY 172
           VLVY
Sbjct: 177 VLVY 180