Pairwise Alignments

Query, 172 a.a., peptidoglycan-associated lipoprotein from Vibrio cholerae E7946 ATCC 55056

Subject, 201 a.a., OmpA family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 79.3 bits (194), Expect = 4e-20
 Identities = 55/178 (30%), Positives = 88/178 (49%), Gaps = 15/178 (8%)

Query: 7   LKSLLIALPVLAVTACSSSDDAANSGSQTNQSA-VSTVDSNGL---------NAQGQLTE 56
           +K+ ++ L V  +  CS  D        T Q++ +S  D +G+          A+G  T+
Sbjct: 1   MKTSILLLSVTLLAGCSIRDTVNIDEMTTTQASDLSDKDGDGVIEARERCNETAKGAGTD 60

Query: 57  Q----ELKEQALRENQTIYFAFDNATIASDYEAMLAAHAAYLVKNPSLRVTIEGHADERG 112
                ++K    R+   + F  ++A IA +Y   +   A +L + P+ +VTIEGH    G
Sbjct: 61  NYGCGQIKSINERKEINVLFPNNSAYIAPEYYPQIEEVAIFLRQYPTTKVTIEGHTSRTG 120

Query: 113 TPEYNIALGERRAQAVAKYL-EALGVQAGQLSIVSYGEEKPLVLGQSEEAYAKNRRAV 169
           T E N  L + RA AV   L E  G+   +L+ + YG  +P+VL Q+ EA  +NRR V
Sbjct: 121 TDETNKELSQERANAVTAVLAERFGIDRSRLTAIGYGSSRPIVLEQTPEAEIRNRRVV 178