Pairwise Alignments

Query, 172 a.a., peptidoglycan-associated lipoprotein from Vibrio cholerae E7946 ATCC 55056

Subject, 370 a.a., OmpA family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 89.7 bits (221), Expect = 5e-23
 Identities = 59/162 (36%), Positives = 82/162 (50%), Gaps = 14/162 (8%)

Query: 13  ALPVLAVTACSSSDDAANSGSQTNQS------AVSTVDSNGLNAQGQLTEQELKEQALRE 66
           A PV A    ++  D+ N G   ++       A   VDS G      + +QE       +
Sbjct: 201 AAPVAAAVVAAAPVDSDNDGVYDDKDECPATPATHKVDSVGCTLYENVKKQE-------D 253

Query: 67  NQTIYFAFDNATIASDYEAMLAAHAAYLVKNPSLRVTIEGHADERGTPEYNIALGERRAQ 126
             +I FA D+A +  +Y   +   A Y+ KNP   V I GHA   G PEYN+ L ++RA 
Sbjct: 254 VGSIQFANDSAVVKKEYYKDIERLANYMNKNPEFTVEIAGHASNVGKPEYNMVLSDKRAD 313

Query: 127 AVAKYL-EALGVQAGQLSIVSYGEEKPLVLGQSEEAYAKNRR 167
           AVAK L E  G+   +++   YG  KPLV G S+EA+A NRR
Sbjct: 314 AVAKILVEKYGISQSRVTSNGYGITKPLVAGNSKEAHAANRR 355