Pairwise Alignments

Query, 172 a.a., peptidoglycan-associated lipoprotein from Vibrio cholerae E7946 ATCC 55056

Subject, 177 a.a., peptidoglycan-associated lipoprotein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  188 bits (477), Expect = 5e-53
 Identities = 98/180 (54%), Positives = 133/180 (73%), Gaps = 11/180 (6%)

Query: 1   MQLNKVLKSLLIALPVLAVTACSSSDDA--------ANSGSQTNQSAVSTVDSNGLNAQG 52
           M LNK+LK++L+ALP++A++ACSS+ ++        + SGS+ N   V T    G+ +  
Sbjct: 1   MDLNKLLKAMLVALPIMAISACSSTSESETDAMGSTSGSGSELN-GGVQTGGIGGMLSPE 59

Query: 53  QLTEQELKEQALRENQTIYFAFDNATIASDYEAMLAAHAAYLVKNPSLRVTIEGHADERG 112
           +   QEL++  LR+   IYF FD + + ++Y A+L AH  YLV++PS+RV IEGHADERG
Sbjct: 60  EQQRQELEQ--LRKEHIIYFDFDRSEVQTEYAAVLEAHGTYLVEHPSVRVLIEGHADERG 117

Query: 113 TPEYNIALGERRAQAVAKYLEALGVQAGQLSIVSYGEEKPLVLGQSEEAYAKNRRAVLVY 172
           TPEYNIALGERRA+AVAKYL+ +GVQ  Q+SIVSYGEEKPL   +++E +AKNRRAVLVY
Sbjct: 118 TPEYNIALGERRAKAVAKYLQGMGVQPSQMSIVSYGEEKPLDFTRTDEGFAKNRRAVLVY 177