Pairwise Alignments

Query, 172 a.a., peptidoglycan-associated lipoprotein from Vibrio cholerae E7946 ATCC 55056

Subject, 396 a.a., outer membrane protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 72.8 bits (177), Expect = 7e-18
 Identities = 48/142 (33%), Positives = 81/142 (57%), Gaps = 7/142 (4%)

Query: 13  ALPVLAVTACSSSDDAANSGSQTNQSAVSTVDSNGLNA----QGQLTEQELKEQALRENQ 68
           AL  LA T   SS   A    +  Q  V+TV     +A    Q Q  E+++ ++ L++N 
Sbjct: 238 ALAGLAFTFGKSSKKTAPVYYEQEQPTVTTVVEQPASAPIVEQPQPKEEKIAKEPLKQN- 296

Query: 69  TIYFAFDNATIASDYEAMLAAHAAYLVKNPSLRVTIEGHAD-ERGTPEYNIALGERRAQA 127
            ++FA ++A I +D ++ +AA   Y+ KNP+ +V + G+AD E G P  N+ L E RA+ 
Sbjct: 297 -VFFALNSARIQTDQQSKIAALVEYMEKNPAAKVNVTGYADKETGNPVINLKLSEARAKN 355

Query: 128 VAKYLEALGVQAGQLSIVSYGE 149
           VA+ L+A G+ + +++I   G+
Sbjct: 356 VAEALKAKGISSDRIAIDFKGD 377