Pairwise Alignments

Query, 172 a.a., peptidoglycan-associated lipoprotein from Vibrio cholerae E7946 ATCC 55056

Subject, 320 a.a., cell envelope biogenesis protein OmpA from Burkholderia phytofirmans PsJN

 Score = 71.6 bits (174), Expect = 1e-17
 Identities = 47/122 (38%), Positives = 63/122 (51%), Gaps = 3/122 (2%)

Query: 46  NGLNAQGQLTEQELKEQALRENQTIYFAFDNATIASDYEAMLAAHAAYLVKNPSLRVTIE 105
           NGL      +EQ L +Q L  N+TI F   +AT+     A+L   AA +VK  +  V I 
Sbjct: 195 NGLRVSA--SEQGLLDQTLA-NRTIEFETGSATLTPQGRAILDQMAAAMVKMTTKTVAII 251

Query: 106 GHADERGTPEYNIALGERRAQAVAKYLEALGVQAGQLSIVSYGEEKPLVLGQSEEAYAKN 165
           GH D  G    NIAL + RA AV  YL A G+   QLS    G ++P+    + +  A+N
Sbjct: 252 GHTDNSGNRTSNIALSQARADAVKGYLVAKGIPPQQLSTTGVGPDQPIASNDTTDGRARN 311

Query: 166 RR 167
           RR
Sbjct: 312 RR 313