Pairwise Alignments

Query, 172 a.a., peptidoglycan-associated lipoprotein from Vibrio cholerae E7946 ATCC 55056

Subject, 178 a.a., OmpA/MotB domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  188 bits (478), Expect = 4e-53
 Identities = 96/180 (53%), Positives = 132/180 (73%), Gaps = 10/180 (5%)

Query: 1   MQLNKVLKSLLIALPVLAVTACSSSDDAAN--------SGSQTNQSAVSTVDSNGLNAQG 52
           M LNK+LK++L+ALP++A++ACSS+ ++          SGS+ N   V T    G+ +  
Sbjct: 1   MDLNKLLKAMLVALPIMAISACSSTSESETDAMGSTNGSGSELNGGGVQTGGIGGMLSPE 60

Query: 53  QLTEQELKEQALRENQTIYFAFDNATIASDYEAMLAAHAAYLVKNPSLRVTIEGHADERG 112
           +   Q+L++  LR+   IYF FD + + +++ A+L AH  YLV++PS+RV IEGHADERG
Sbjct: 61  EQQRQQLEQ--LRKEHIIYFDFDRSEVQTEFAAVLEAHGTYLVEHPSVRVLIEGHADERG 118

Query: 113 TPEYNIALGERRAQAVAKYLEALGVQAGQLSIVSYGEEKPLVLGQSEEAYAKNRRAVLVY 172
           TPEYNIALGERRA+AVAKYL+ +GVQ  Q+SIVSYGEEKPL   +++E +AKNRRAVLVY
Sbjct: 119 TPEYNIALGERRAKAVAKYLQGMGVQPSQMSIVSYGEEKPLDFTRTDEGFAKNRRAVLVY 178