Pairwise Alignments

Query, 254 a.a., tol-pal system protein YbgF from Vibrio cholerae E7946 ATCC 55056

Subject, 240 a.a., TPR repeat-containing protein (RefSeq) from Shewanella loihica PV-4

 Score =  196 bits (497), Expect = 5e-55
 Identities = 107/250 (42%), Positives = 162/250 (64%), Gaps = 14/250 (5%)

Query: 5   LKHVVMLMLLASAASYALAAPAPVSDLGSNVSGGSRSSEIERLERLLESRNLVQLQMQKQ 64
           +K  V+   +  +   A+AAPAPV D    V+GGS    + RLER+++++   + +MQ++
Sbjct: 1   MKTAVVTAAILMSVGVAVAAPAPVED----VAGGSSEDRVARLERIIKAKQAAEFEMQQR 56

Query: 65  LDDMALEVNELRGQIEKNNYDMQQMLQRQRELFVELDRVRGEMKSPSSGAGQLPTSSNDE 124
           LD +  EV +LRG  E+ +Y + QMLQRQR+L+   D +    K+ S+     P +++ E
Sbjct: 57  LDTLQQEVLDLRGLTEQQSYQINQMLQRQRQLY---DDIANLSKAKSTPVAATPVATSSE 113

Query: 125 AAQGTFSSDANEQAAYQNAVDLILKKRDYAGAIAAFQKFQTDYPNSTFSANAHYWLGQLY 184
                 +S   E A+Y+ AV+L+LK+R Y  AI AF++F   YPNST++ANA+YWLGQL 
Sbjct: 114 ------TSSLGETASYERAVNLVLKERQYDEAIPAFREFIAQYPNSTYAANANYWLGQLL 167

Query: 185 FAKKEDKEAAKSFAAVVSD-KGSNKRADALVKLGDIAKRNNNAEQARKFYQQAVDEYPDS 243
           + K E  EA K+F  VV+  K SNKR D+LVKLG IA++ N+   A+++YQQ V EY +S
Sbjct: 168 YNKGELAEAGKAFNTVVNQFKESNKRGDSLVKLGMIAQKRNDNAAAKRYYQQVVSEYANS 227

Query: 244 ASAKIAKENL 253
           A+A+IAK+ +
Sbjct: 228 AAARIAKQQM 237