Pairwise Alignments

Query, 736 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 645 a.a., Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal from Pseudomonas syringae pv. syringae B728a

 Score =  242 bits (617), Expect = 5e-68
 Identities = 137/375 (36%), Positives = 218/375 (58%), Gaps = 6/375 (1%)

Query: 349 KAQASTKAKSAFLATLSHEIRTPMNGVLGTAQILLKDELTSKQRQHLTSLYESGEHMMSL 408
           +A+ + +AKS FLA +SHE+RTPMNGVLG  Q+L    +T +Q ++ T   ES EH++ +
Sbjct: 259 EAEQANRAKSDFLAMMSHELRTPMNGVLGMLQLLETTHMTHEQSEYATLATESTEHLLRV 318

Query: 409 LNEILDYSKIEQGKFELDHSAFPLKSIIGSIKSIYSSLCVEKGLKFQLNSEI-TDGRWYY 467
           +N+ILD+S+IE+   +++   F L  ++ +    ++    ++ L  +L+ +   +     
Sbjct: 319 INDILDFSRIERDALQMEGIPFNLAELVSASTHAFNHSAAQRNLLLELHIQPGLETMNVI 378

Query: 468 GDKARLRQIIFNLLSNAVKFTEAGFVAIGLSEESCDEEN-YLIIKVQDTGIGIAQESLGR 526
           GD  R+RQI+ NL+ NA+KFTE G V +       D+E  +    VQD+GIGI  E L  
Sbjct: 379 GDPTRIRQILVNLIGNALKFTERGKVCVDARWAMLDDERLHFTCAVQDSGIGIDAERLES 438

Query: 527 IFRPFEQAESHTTRRFGGTGLGLAIVKQIAELMNGTVLVQSEVGQGSCFKVRVKLAITEP 586
           +F  F+QA+S  +RR+GGTGLGL I + +AE M GT+  +S+ G GS F +++ L ++  
Sbjct: 439 MFDAFKQADSSISRRYGGTGLGLPIARTLAERMGGTLYAESKEGSGSLFTLQIPLPLSRD 498

Query: 587 VTEDV-KPTKAKTYPGLR--VLIVEDNRTNIMILEAFMRNKGFECHSVMDGVQAITALQE 643
            +  + KP       G    +L+VEDN  N  +++A +RN G E    +DG +A+   + 
Sbjct: 499 ASVAIAKPLSILDAHGRERSILLVEDNPVNRTVVQAMLRNLGCEVDIAVDGAEAVMKARA 558

Query: 644 SSFDLVLMDNHMPLKDGIQATREIRQLPLPQAKILLFGCTADVFKDTRDKMLSAGADDII 703
            +  L+LMD  +P+ DG +ATR IRQL     +I +   TA+  +  RD  L AG DD +
Sbjct: 559 GNHALILMDCRLPVMDGYEATRRIRQLS-GLERIPIIALTANALQGDRDACLQAGMDDYL 617

Query: 704 AKPIAEHELDMALEQ 718
            KP    +L   L++
Sbjct: 618 PKPFKHADLQQVLQR 632