Pairwise Alignments

Query, 736 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 1261 a.a., response regulator from Synechocystis sp000284455 PCC 6803

 Score =  241 bits (614), Expect = 2e-67
 Identities = 152/413 (36%), Positives = 232/413 (56%), Gaps = 30/413 (7%)

Query: 323 YKSQDEIRHLIDTF------NQKTIY-----------LEAE----KVKAQASTKAKSAFL 361
           Y  + EIR ++ TF       QK I             EAE    K  A+ +++ K+ FL
Sbjct: 472 YNPRGEIRDILATFLATDYEGQKGILGWLADITPIKAAEAEMKRAKELAEEASRIKADFL 531

Query: 362 ATLSHEIRTPMNGVLGTAQILLKDELTSKQRQHLTSLYESGEHMMSLLNEILDYSKIEQG 421
           A +SHEIRTPMN V+G   + LK +LT +QR++L  +  SG+H++ ++N+ILD+SKIE G
Sbjct: 532 ANMSHEIRTPMNAVIGMTHLALKTDLTPRQREYLHKIRFSGQHLLGVINDILDFSKIEAG 591

Query: 422 KFELDHSAFPLKSIIGSIKSIYSSLCVEKGLKFQLNSEITDGRWYYGDKARLRQIIFNLL 481
           K  ++   F L  ++ ++ ++ S     KGL+   + +    R + GD  RL QI+ N  
Sbjct: 592 KLPMESIDFDLDKVLDNVATLISEKATNKGLELLFDIDRNLPRHFIGDPLRLGQILINYA 651

Query: 482 SNAVKFTEAGFVAIGLS-EESCDEENYLIIKVQDTGIGIAQESLGRIFRPFEQAESHTTR 540
           +NAVKFTE G + I +  +E  D++  L + V+DTGIGI  E +  +F  F+QA+S TTR
Sbjct: 652 NNAVKFTEQGDITIVVRLQEYRDQDVVLYLAVKDTGIGIKPEHIANLFNSFQQADSSTTR 711

Query: 541 RFGGTGLGLAIVKQIAELMNGTVLVQSEVGQGSCFKVRVKLAITEPVTEDVKPTKAKTYP 600
            FGGTGLGLAI K+IAELM G V V+SE GQGS F  +V L  +  +    +   +K   
Sbjct: 712 NFGGTGLGLAICKRIAELMGGEVGVESEYGQGSTFWAKVCLQKSNVIPH--RLVLSKDLE 769

Query: 601 GLRVLIVEDNRTNIMILEAFMRNKGFECHSVMDGVQAITALQESS-----FDLVLMDNHM 655
           G RVL+V+DN    ++++  +    F   +V  G +A+  L E+        +V +D  M
Sbjct: 770 GKRVLVVDDNDHARLVMKDLLEQMKFVVETVESGPEALNFLAEADRENHPHSIVFIDWQM 829

Query: 656 PLKDGIQATREIRQLPLPQAKILLFGCTADVFKDTRDKMLSAGADDIIAKPIA 708
           P  DG++  R ++ + L   +  +F  TA   ++   K  S G DD++ KPI+
Sbjct: 830 PNMDGLEVARRLKAMGL-NHQPSIFIVTAYGREELFVKAKSLGIDDVLVKPIS 881



 Score = 81.6 bits (200), Expect = 2e-19
 Identities = 47/124 (37%), Positives = 70/124 (56%), Gaps = 1/124 (0%)

Query: 589  EDVKPTKAKTYPGLRVLIVEDNRTNIMILEAFMRNKGFECHSVMDGVQAITALQESSFDL 648
            ED+   K +   G R+L+VEDN  N  +    +R+ GF      +G+ A+  L  +++ L
Sbjct: 912  EDLALEKLRRIRGARILLVEDNEINQEVAAELLRDVGFNVDVAANGLIALERLNNNAYAL 971

Query: 649  VLMDNHMPLKDGIQATREIRQLPLPQAKILLFGCTADVFKDTRDKMLSAGADDIIAKPIA 708
            VLMD  MP  DGI+AT  IRQ P   A++ +   TA+V +  R++ L AG +D + KPI 
Sbjct: 972  VLMDMQMPEMDGIEATIAIRQNP-RYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKPIE 1030

Query: 709  EHEL 712
              EL
Sbjct: 1031 PEEL 1034