Pairwise Alignments

Query, 736 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 1141 a.a., putative integral membrane sensor protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  221 bits (564), Expect = 1e-61
 Identities = 137/374 (36%), Positives = 218/374 (58%), Gaps = 20/374 (5%)

Query: 343 LEAEKVKAQASTKAKSAFLATLSHEIRTPMNGVLGTAQILLKDELTSKQRQHLTSLYESG 402
           LEA+ + A+A+  A++AFLA +SHEIRTPMN ++G + ILL+ +   ++ +HL ++  + 
Sbjct: 523 LEAKDI-AEAAATARAAFLANMSHEIRTPMNAIIGFSDILLESQFEPEKHRHLKTINHAA 581

Query: 403 EHMMSLLNEILDYSKIEQGKFELDHSAFPLKSIIGSIKSIYSSLCVE---KGLKFQLNSE 459
           + ++ LLN++LD +K+++GK EL+   F   S++  +  + S+L ++   KGL+  +   
Sbjct: 582 KSLLHLLNDVLDSAKLDKGKLELEVRDF---SLVQELDEVISTLWLQARRKGLQLTMEVS 638

Query: 460 ITDGRWYYGDKARLRQIIFNLLSNAVKFTEAGFVAIGLSEESCDEENYLIIKVQDTGIGI 519
                 Y G   R+RQ++ NL+SNAVKFTE G V + ++     + N++   V+DTGIG+
Sbjct: 639 PKLLPCYAGSPERIRQVLTNLVSNAVKFTEKGQVRLTVNP---GQGNHVDFVVEDTGIGM 695

Query: 520 AQESLGRIFRPFEQAESHTTRRFGGTGLGLAIVKQIAELMNGTVLVQSEVGQGS--CFKV 577
           + E L +IF PF QA++  +RRFGGTGLG  I KQ+ ELM G +   SE+G+GS  CF  
Sbjct: 696 SPEQLDKIFDPFTQADASMSRRFGGTGLGTTISKQLVELMGGHISAGSELGKGSRFCF-- 753

Query: 578 RVKLAITEPVTEDVKPTKAK-TYPGLRVLIVEDNRTNIMILEAFMRNKGFECHSVMDGVQ 636
              L +   V +++ P +   + P + VL+V+D   N+ +L   +   G    +  DG Q
Sbjct: 754 --SLPLNPGVCDELVPLENHVSLPPMTVLVVDDIAQNLELLSTLLGRDGHRVITESDGQQ 811

Query: 637 AITAL-QESSFDLVLMDNHMPLKDGIQATREIRQLPLPQ--AKILLFGCTADVFKDTRDK 693
           A+  +  E + DLVLMD  MP+ DG+ A+R  R     +    + +   TA V +D R  
Sbjct: 812 ALARMASEPAIDLVLMDVQMPVMDGLSASRARRDKEQREGLTHLPIIALTASVLEDDRTA 871

Query: 694 MLSAGADDIIAKPI 707
              AG D    KPI
Sbjct: 872 ARQAGMDGFANKPI 885