Pairwise Alignments

Query, 736 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 1560 a.a., Multi-sensor Hybrid Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

 Score =  208 bits (529), Expect = 2e-57
 Identities = 130/381 (34%), Positives = 211/381 (55%), Gaps = 19/381 (4%)

Query: 347  KVKAQASTKAKSAFLATLSHEIRTPMNGVLGTAQILLKDELTSKQRQHLTSLYESGEHMM 406
            K  A+ ++  K  FLA +SHEIRTPMN +LG   ++ +  LT  Q  ++   + +   ++
Sbjct: 886  KQAAEEASVVKGQFLANMSHEIRTPMNAILGMLTLVQRTALTPHQADYVCKAHSAAGSLL 945

Query: 407  SLLNEILDYSKIEQGKFELDHSAFPLKSIIGSIKSIYSSLCVEKGLK--FQLNSEITDGR 464
             LLN+ILD+SKIE GK  L+   F L++++  +  + S    +KG++  F +   + D  
Sbjct: 946  GLLNDILDFSKIEAGKLHLEPHPFRLETVLRDLAVVLSGSYGDKGVEVLFDIAPHLPDS- 1004

Query: 465  WYYGDKARLRQIIFNLLSNAVKFTEAGFVAIGLSEESCDEENYLI-IKVQDTGIGIAQES 523
             + GD  RLRQ++ NL  NA+KFT+ G V + +   + +++   + + V DTGIGIA + 
Sbjct: 1005 -FIGDDLRLRQVLLNLAGNALKFTDQGQVIVSVGVLAREDDRLTMRMAVSDTGIGIAADQ 1063

Query: 524  LGRIFRPFEQAESHTTRRFGGTGLGLAIVKQIAELMNGTVLVQSEVGQGSCFKVRVKLAI 583
            L  IF  FEQAE+ TTRRFGG+GLGL I + + E M G + V+S+ G+GS F   + L +
Sbjct: 1064 LASIFGAFEQAETSTTRRFGGSGLGLTITRHLVERMGGVLRVESQPGRGSRFWFDITLPV 1123

Query: 584  TEPVTEDVKPTKAKTYPGLRVLIVEDNRTNIMILEAFMRNKGFECHSVMDGVQAITALQE 643
            +   +E      A++   LRVL+VEDN     IL   ++  G++C  V +  +    +  
Sbjct: 1124 SGEGSE-----SAESGRPLRVLVVEDNPVAGGILAQTVQGLGYDCDLVQESAETKARIVA 1178

Query: 644  SS-----FDLVLMDNHMPLKDGIQATREIRQLPL---PQAKILLFGCTADVFKDTRDKML 695
            +      +D VL+D  MP  DG+   R +R++ +   PQ+ I++     DV     ++  
Sbjct: 1179 ADAAGRPYDAVLLDWRMPEVDGLTTARILREMGVTLCPQSIIMVTAYGRDVL-SLAEQTG 1237

Query: 696  SAGADDIIAKPIAEHELDMAL 716
             A  D ++ KP+   +L  AL
Sbjct: 1238 DAPFDAVLTKPVTPGQLRDAL 1258



 Score = 53.1 bits (126), Expect = 1e-10
 Identities = 36/109 (33%), Positives = 55/109 (50%), Gaps = 3/109 (2%)

Query: 601  GLRVLIVEDNRTNIMILEAFMRNKGFECHSVMDGVQAITALQ--ESSFDLVLMDNHMPLK 658
            G R+L+VEDN  N  +    +   G E      G + +  +   E ++D VLMD  MP  
Sbjct: 1284 GRRLLVVEDNAINRQVAAELLAGAGAEIDLAEGGERGVMMVLRGEIAYDAVLMDIQMPDI 1343

Query: 659  DGIQATREIRQLPLPQAKILLFGCTADVFKDTRDKMLSAGADDIIAKPI 707
            DG +ATR IR     +A + +   TA+  +  R+  L+AG  + + KPI
Sbjct: 1344 DGFEATRRIRADARFKA-LPIVAMTANASRADREACLAAGMTEHVGKPI 1391