Pairwise Alignments

Query, 736 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 866 a.a., PAS/PAC Sensor Hybrid Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

 Score =  223 bits (569), Expect = 2e-62
 Identities = 139/393 (35%), Positives = 203/393 (51%), Gaps = 13/393 (3%)

Query: 327 DEIRHLIDTFNQKTIYLEAEKVKAQASTKAKSAFLATLSHEIRTPMNGVLGTAQILLKDE 386
           D+IRH  D        L   K +A+ + +AKS FLA +SHE+RTP+NGVLG A +L    
Sbjct: 477 DQIRHESD--------LRKVKDEAEVANRAKSDFLAVMSHELRTPLNGVLGMADLLCDTP 528

Query: 387 LTSKQRQHLTSLYESGEHMMSLLNEILDYSKIEQGKFELDHSAFPLKSIIGSIKSIYSSL 446
           L ++QR++  ++  S E ++ ++N+ILD SKIE G  +L+   F   +++  ++++    
Sbjct: 529 LDAEQRRYTRTIAISAEALLVIINDILDLSKIEAGHLDLESRPFDPATLLEGVRTLMEGP 588

Query: 447 CVEKGLKFQLNSEITDGRWYYGDKARLRQIIFNLLSNAVKFTEAGFVAIGLSEESCDEEN 506
             +K +  + + E        GD+ RLRQI+ NL +N VKFTE G + + L         
Sbjct: 589 ARDKAIALRTSIEGAKPPLRLGDEGRLRQILLNLANNGVKFTEKGSLTLRL---KAGTGG 645

Query: 507 YLIIKVQDTGIGIAQESLGRIFRPFEQAESHTTRRFGGTGLGLAIVKQIAELMNGTVLVQ 566
            L  +V+DTGIGI +E    +F  F Q  + T RRFGG+GLGL+I +++  LM G +   
Sbjct: 646 ALRFEVEDTGIGIPKEKQDTLFHDFTQVSASTARRFGGSGLGLSICRRLVGLMGGRLGFD 705

Query: 567 SEVGQGSCFKVRVKLAITEPVTEDVKPTKAKTYPGLRVLIVEDNRTNIMILEAFMRNKGF 626
           S  G GS F   V L   E V     P      P L +L+VEDN  N  +    +   G 
Sbjct: 706 STPGVGSLFWFEVDL--PEVVASQSPPPPPFQGPPLSILVVEDNEINRQVALGLLTKLGH 763

Query: 627 ECHSVMDGVQAITALQESSFDLVLMDNHMPLKDGIQATREIRQLPLPQAKILLFGCTADV 686
               V DG  A+  +    FDL+LMD  MP  DG +ATR IR  P P   + +   TA+ 
Sbjct: 764 RVTCVDDGAAAVRVVDTMPFDLILMDVQMPGMDGYEATRLIRGKPAPVGGLPIVAMTANA 823

Query: 687 FKDTRDKMLSAGADDIIAKPIAEHELDMALEQH 719
                   ++AG    ++KPI    L  AL  H
Sbjct: 824 TSGDVAAAMAAGMTGYLSKPITRKRLAEALMAH 856